Veröffentlichungen "Elhabashy, Hadeer"

2025

Bodin, Stéphane ; Elhabashy, Hadeer ; Macdonald, Ewan ; Winter, Dominic ; Gauthier-Rouvière, Cécile:
Flotillins in membrane trafficking and physiopathology.
In: Biology of the Cell. Bd. 117 (2025) Heft 1 . - e2400134.
ISSN 1768-322X
DOI: https://doi.org/10.1111/boc.202400134

2024

Röhl, Alexander ; Netz, Eugen ; Kohlbacher, Oliver ; Elhabashy, Hadeer:
CLAUDIO: automated structural analysis of cross-linking data.
In: Bioinformatics. Bd. 40 (2024) Heft 4 . - btae146.
ISSN 1367-4803
DOI: https://doi.org/10.1093/bioinformatics/btae146

2023

Podobnik, Marco ; Singh, Ajeet P. ; Fu, Zhenqiang ; Dooley, Christopher M. ; Frohnhöfer, Hans Georg ; Firlej, Magdalena ; Stednitz, Sarah J. ; Elhabashy, Hadeer ; Weyand, Simone ; Weir, John R. ; Lu, Jianguo ; Nüsslein-Volhard, Christiane ; Irion, Uwe:
kcnj13 regulates pigment cell shapes in zebrafish and has diverged by cis-regulatory evolution between Danio species.
In: Development. Bd. 150 (2023) Heft 16 . - dev201627.
ISSN 1477-9129
DOI: https://doi.org/10.1242/dev.201627

Elhabashy, Hadeer:
Method Development for Large-Scale Prediction and Modeling of Protein-Protein Interactions.
Tübingen , 2023
( Dissertation, 2023 , Universität Tübingen)
DOI: https://doi.org/10.15496/publikation-90017

Elhabashy, Hadeer ; Netz, Eugen ; Kohlbacher, Oliver:
XLEC: Large-scale prediction and modeling of protein-protein interaction using sequence co-evolution and cross-linking data.
2023
Veranstaltung: 11th Symposium on Structural Proteomics (SSP 2023) , 24-25 April 2023 , Utrecht, The Netherlands.
(Veranstaltungsbeitrag: Kongress/Konferenz/Symposium/Tagung , Vortrag )

2022

Singh, Jasjot ; Elhabashy, Hadeer ; Muthukottiappan, Pathma ; Stepath, Markus ; Eisenacher, Martin ; Kohlbacher, Oliver ; Gieselmann, Volkmar ; Winter, Dominic:
Cross-linking of the endolysosomal system reveals potential flotillin structures and cargo.
In: Nature Communications. Bd. 13 (2022) . - 6212.
ISSN 2041-1723
DOI: https://doi.org/10.1038/s41467-022-33951-0

Elhabashy, Hadeer ; Merino, Felipe ; Alva, Vikram ; Kohlbacher, Oliver ; Lupas, Andrei N.:
Exploring protein-protein interactions at the proteome level.
In: Structure. Bd. 30 (2022) Heft 4 . - S. 462-475.
ISSN 0969-2126
DOI: https://doi.org/10.1016/j.str.2022.02.004

2021

Green, Anna G. ; Elhabashy, Hadeer ; Brock, Kelly P. ; Maddamsetti, Rohan ; Kohlbacher, Oliver ; Marks, Debora S.:
Large-scale discovery of protein interactions at residue resolution using co-evolution calculated from genomic sequences.
In: Nature Communications. Bd. 12 (2021) . - 1396.
ISSN 2041-1723
DOI: https://doi.org/10.1038/s41467-021-21636-z

2020

Biggers, Laurence ; Elhabashy, Hadeer ; Ackad, Edward ; Yousef, Mohammad S.:
Molecular dynamics simulations of an engineered T4 lysozyme exclude helix to sheet transition, and provide insights into long distance, intra-protein switchable motion.
In: Protein Science. Bd. 29 (2020) Heft 2 . - S. 542-554.
ISSN 1469-896X
DOI: https://doi.org/10.1002/pro.3780

2013

Kholmurodov, Kholmirzo T. ; Dushanov, Ermuhammad B. ; Krasavin, Evgenii A. ; Hassan, Hagar K. ; Elhabashy, Hadeer ; Galal, Ahmed ; Sweilam, Nasser H. ; Yasuoka, Kenji:
Molecular dynamics simulations of the DNA interaction with metallic nanoparticles and TiO₂ surfaces.
In: Models in Bioscience and Materials Research : Molecular Dynamics and Related Techniques. - New York : Nova Science Publishers , 2013 . - S. 167-200
ISBN 9781628080520