at Google ScholarTitle data
Ovaskainen, Otso ; Abrego, Nerea ; Furneaux, Brendan ; Hardwick, Bess ; Somervuo, Panu ; Palorinne, Isabella ; Andrew, Nigel R. ; Babiy, Ulyana V. ; Bao, Tan ; Bazzano, Gisela ; Bondarchuk, Svetlana N. ; Bonebrake, Timothy C. ; Brennan, Georgina L. ; Bret-Harte, Syndonia ; Bässler, Claus ; Cagnolo, Luciano ; Cameron, Erin K. ; Chapurlat, Elodie ; Creer, Simon ; D’Acqui, Luigi P. ; de Vere, Natasha ; Desprez-Loustau, Marie-Laure ; Dongmo, Michel A. K. ; Dyrholm Jacobsen, Ida B. ; Fisher, Brian L. ; Flores de Jesus, Miguel ; Gilbert, Gregory S. ; Griffith, Gareth W. ; Gritsuk, Anna A. ; Gross, Andrin ; Grudd, Håkan ; Halme, Panu ; Hanna, Rachid ; Hansen, Jannik ; Holst Hansen, Lars ; Hegbe, Apollon D. M. T. ; Hill, Sarah ; Hogg, Ian D. ; Hultman, Jenni ; Hyde, Kevin D. ; Hynson, Nicole A. ; Ivanova, Natalia ; Karisto, Petteri ; Kerdraon, Deirdre ; Knorre, Anastasia ; Krisai-Greilhuber, Irmgard ; Kurhinen, Juri ; Kuzmina, Masha ; Lecomte, Nicolas ; Lecomte, Erin ; Loaiza, Viviana ; Lundin, Erik ; Meire, Alexander ; Mešić, Armin ; Miettinen, Otto ; Monkhause, Norman ; Mortimer, Peter ; Müller, Jörg ; Nilsson, R. Henrik ; Nonti, Puani Yannick C. ; Nordén, Jenni ; Nordén, Björn ; Paz, Claudia ; Pellikka, Petri ; Pereira, Danilo ; Petch, Geoff ; Pitkänen, Juha-Matti ; Popa, Flavius ; Potter, Caitlin ; Purhonen, Jenna ; Pätsi, Sanna ; Rafiq, Abdullah ; Raharinjanahary, Dimby ; Rakos, Niklas ; Rathnayaka, Achala R. ; Raundrup, Katrine ; Rebriev, Yury A. ; Rikkinen, Jouko ; Rogers, Hanna M. K. ; Rogovsky, Andrey ; Rozhkov, Yuri ; Runnel, Kadri ; Saarto, Annika ; Savchenko, Anton ; Schlegel, Markus ; Schmidt, Niels Martin ; Seibold, Sebastian ; Skjøth, Carsten ; Stengel, Elisa ; Sutyrina, Svetlana V. ; Syvänperä, Ilkka ; Tedersoo, Leho ; Timm, Jebidiah ; Tipton, Laura ; Toju, Hirokazu ; Uscka-Perzanowska, Maria ; van der Bank, Michelle ; van der Bank, F. Herman ; Vandenbrink, Bryan ; Ventura, Stefano ; Vignisson, Solvi R. ; Wang, Xiaoyang ; Weisser, Wolfgang W. ; Wijesinghe, Subodini N. ; Wright, S. Joseph ; Yang, Chunyan ; Yorou, Nourou S. ; Young, Amanda ; Yu, Douglas W. ; Zakharov, Evgeny V. ; Hebert, Paul D. N. ; Roslin, Tomas:
Global Spore Sampling Project : A global, standardized dataset of airborne fungal DNA.
In: Scientific Data.
Vol. 11
(2024)
.
- 561.
ISSN 2052-4463
DOI: https://doi.org/10.1038/s41597-024-03410-0
Abstract in another language
Novel methods for sampling and characterizing biodiversity hold great promise for re-evaluating patterns of life across the planet. The sampling of airborne spores with a cyclone sampler, and the sequencing of their DNA, have been suggested as an efficient and well-calibrated tool for surveying fungal diversity across various environments. Here we present data originating from the Global Spore Sampling Project, comprising 2,768 samples collected during two years at 47 outdoor locations across the world. Each sample represents fungal DNA extracted from 24 m3 of air. We applied a conservative bioinformatics pipeline that filtered out sequences that did not show strong evidence of representing a fungal species. The pipeline yielded 27,954 species-level operational taxonomic units (OTUs). Each OTU is accompanied by a probabilistic taxonomic classification, validated through comparison with expert evaluations. To examine the potential of the data for ecological analyses, we partitioned the variation in species distributions into spatial and seasonal components, showing a strong effect of the annual mean temperature on community composition.
Further data
| Item Type: | Article in a journal |
|---|---|
| Refereed: | Yes |
| Institutions of the University: | Faculties > Faculty of Biology, Chemistry and Earth Sciences > Department of Biology > Chair Fungal Ecology > Chair Fungal Ecology - Univ.-Prof. Dr. Claus Bässler Research Institutions > Central research institutes > Bayreuth Center of Ecology and Environmental Research- BayCEER |
| Result of work at the UBT: | Yes |
| DDC Subjects: | 500 Science > 550 Earth sciences, geology 500 Science > 570 Life sciences, biology |
| Date Deposited: | 07 Nov 2024 08:20 |
| Last Modified: | 07 Nov 2024 08:20 |
| URI: | https://eref.uni-bayreuth.de/id/eprint/90972 |