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Deciphering the protein-RNA recognition code : Combining large-scale quantitative methods with structural biology

Title data

Hennig, Janosch ; Sattler, Michael:
Deciphering the protein-RNA recognition code : Combining large-scale quantitative methods with structural biology.
In: BioEssays. Vol. 37 (2015) Issue 8 . - pp. 899-908.
ISSN 1521-1878
DOI: https://doi.org/10.1002/bies.201500033

Abstract in another language

RNA binding proteins (RBPs) are key factors for the regulation of gene expression by binding to cis elements, i.e. short sequence motifs in RNAs. Recent studies demonstrate that cooperative binding of multiple RBPs is important for the sequence-specific recognition of RNA and thereby enables the regulation of diverse biological activities by a limited set of RBPs. Cross-linking immuno-precipitation (CLIP) and other recently developed high-throughput methods provide comprehensive, genome-wide maps of protein-RNA interactions in the cell. Structural biology gives detailed insights into molecular mechanisms and principles of RNA recognition by RBPs, but has so far focused on single RNA binding proteins and often on single RNA binding domains. The combination of high-throughput methods and detailed structural biology studies is expected to greatly advance our understanding of the code for protein-RNA recognition in gene regulation, as we review in this article.

Further data

Item Type: Article in a journal
Refereed: Yes
Keywords: CLIP; RNA binding proteins; RNA recognition motif; cooperativity; mRNA interactome; protein-RNA recognition; structural biology
Institutions of the University: Faculties > Faculty of Biology, Chemistry and Earth Sciences > Department of Chemistry > Chair Biochemistry with an Emphasis on Biophysical Chemistry > Chair Biochemistry with an Emphasis on Biophysical Chemistry - Univ.-Prof. Dr. Janosch Hennig
Result of work at the UBT: No
DDC Subjects: 500 Science > 540 Chemistry
500 Science > 570 Life sciences, biology
Date Deposited: 07 Oct 2021 12:56
Last Modified: 07 Oct 2021 12:56
URI: https://eref.uni-bayreuth.de/id/eprint/67240