Publications "Uebe, René"

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Number of items: 29.

Article in a journal

Dziuba, Marina ; Paulus, Anja ; Schramm, L. ; Awal, Ram Prasad ; Pósfai, M. ; Monteil, C. L. ; Fouteau, S. ; Uebe, René ; Schüler, Dirk:
Silent gene clusters encode magnetic organelle biosynthesis in a non-magnetotactic phototrophic bacterium.
In: The ISME Journal. Vol. 17 (2023) Issue 3 . - pp. 326-339.
ISSN 1751-7370
DOI: https://doi.org/10.1038/s41396-022-01348-y

Zwiener, Theresa ; Mickoleit, Frank ; Dziuba, Marina ; Rückert, Christian ; Busche, Tobias ; Kalinowski, Jörn ; Faivre, Damien ; Uebe, René ; Schüler, Dirk:
Identification and elimination of genomic regions irrelevant for magnetosome biosynthesis by large-scale deletion in Magnetospirillum gryphiswaldense.
In: BMC Microbiology. Vol. 21 (2021) . - 65.
ISSN 1471-2180
DOI: https://doi.org/10.1186/s12866-021-02124-2

Mickoleit, Frank ; Rosenfeldt, Sabine ; Schenk, Anna ; Schüler, Dirk ; Uebe, René:
Multifunktionale bakterielle Nanomagnete für Biotechnologie und Medizin.
In: BIOspektrum. Vol. 27 (2021) Issue 4 . - pp. 442-444.
ISSN 1868-6249
DOI: https://doi.org/10.1007/s12268-021-1593-5

Zwiener, Theresa ; Dziuba, Marina ; Mickoleit, Frank ; Rückert, Christian ; Busche, Tobias ; Kalinowski, Jörn ; Uebe, René ; Schüler, Dirk:
Towards a "chassis" for bacterial magnetosome biosynthesis : genome streamlining of Magnetospirillum gryphiswaldense by multiple deletions.
In: Microbial Cell Factories. Vol. 20 (2021) . - 35.
ISSN 1475-2859
DOI: https://doi.org/10.1186/s12934-021-01517-2

Rosenfeldt, Sabine ; Mickoleit, Frank ; Jörke, Cornelia ; Clement, Joachim H. ; Markert, Simon ; Jérôme, Valérie ; Schwarzinger, Stephan ; Freitag, Ruth ; Schüler, Dirk ; Uebe, René ; Schenk, Anna:
Towards standardized purification of bacterial magnetic nanoparticles for future in vivo applications.
In: Acta Biomaterialia. Vol. 120 (2021) . - pp. 293-303.
ISSN 1878-7568
DOI: https://doi.org/10.1016/j.actbio.2020.07.042

Riese, Cornelius N. ; Uebe, René ; Rosenfeldt, Sabine ; Schenk, Anna ; Jérôme, Valérie ; Freitag, Ruth ; Schüler, Dirk:
An automated oxystat fermentation regime for microoxic cultivation of Magnetospirillum gryphiswaldense.
In: Microbial Cell Factories. Vol. 19 (2020) . - 206.
ISSN 1475-2859
DOI: https://doi.org/10.1186/s12934-020-01469-z

Silva, Karen T. ; Schüler, Margarete ; Mickoleit, Frank ; Zwiener, Theresa ; Müller, Frank D. ; Awal, Ram Prasad ; Weig, Alfons ; Brachmann, Andreas ; Uebe, René ; Schüler, Dirk:
Genome-Wide Identification of Essential and Auxiliary Gene Sets for Magnetosome Biosynthesis in Magnetospirillum gryphiswaldense.
In: mSystems. Vol. 5 (2020) Issue 6 . - e00565-20.
ISSN 2379-5077
DOI: https://doi.org/10.1128/mSystems.00565-20

Dziuba, Marina ; Zwiener, Theresa ; Uebe, René ; Schüler, Dirk:
Single-step transfer of biosynthetic operons endows a non-magnetotactic Magnetospirillum strain from wetland with magnetosome biosynthesis.
In: Environmental Microbiology. Vol. 22 (2020) Issue 4 . - pp. 1603-1618.
ISSN 1462-2920
DOI: https://doi.org/10.1111/1462-2920.14950

Uebe, René ; Ahrens, Frederik ; Stang, Jörg ; Jäger, Katharina ; Böttger, Lars H. ; Schmidt, Christian ; Matzanke, Berthold F. ; Schüler, Dirk:
Bacterioferritin of Magnetospirillum gryphiswaldense Is a Heterotetraeicosameric Complex Composed of Functionally Distinct Subunits but Is Not Involved in Magnetite Biomineralization.
In: mBio. Vol. 10 (2019) Issue 3 .
ISSN 2150-7511
DOI: https://doi.org/10.1128/mBio.02795-18

Schüler, Dirk ; Uebe, René:
Nanokristalle für die Magnetfeldorientierung : Biogenese von Magnetosomen.
In: BIOspektrum. Vol. 25 (2019) Issue 1 . - pp. 22-25.
ISSN 1868-6249
DOI: https://doi.org/10.1007/s12268-019-0997-y

Liu, Pengfei ; Hirt, Ann M. ; Schüler, Dirk ; Uebe, René ; Zhu, Peimin ; Liu, Tianyou ; Zhang, Henglei:
Numerical unmixing of weakly and strongly magnetic minerals : examples with synthetic mixtures of magnetite and hematite.
In: Geophysical Journal International. Vol. 217 (2019) Issue 1 . - pp. 280-287.
ISSN 1365-246X
DOI: https://doi.org/10.1093/gji/ggz022

Uebe, René ; Keren-Khadmy, Noa ; Zeytuni, Natalie ; Katzmann, Emanuel ; Navon, Yotam ; Davidov, Geula ; Bitton, Ronit ; Plitzko, Jürgen M. ; Schüler, Dirk ; Zarivach, Raz:
The dual role of MamB in magnetosome membrane assembly and magnetite biomineralization.
In: Molecular Microbiology. Vol. 107 (2018) Issue 4 . - pp. 542-557.
ISSN 1365-2958
DOI: https://doi.org/10.1111/mmi.13899

Uebe, René ; Schüler, Dirk ; Jogler, Christian ; Wiegand, Sandra:
Reevaluation of the Complete Genome Sequence of Magnetospirillum gryphiswaldense MSR-1 with Single-Molecule Real-Time Sequencing Data.
In: Microbiology Resource Announcements. Vol. 6 (2018) Issue 17 .
ISSN 2576-098X
DOI: https://doi.org/10.1128/genomeA.00309-18

Kraupner, Alexander ; Eberbeck, Dietmar ; Heinke, David ; Uebe, René ; Schüler, Dirk ; Briel, Andreas:
Bacterial Magnetosomes : Nature´s powerful contribution to MPI tracer research.
In: Nanoscale. Vol. 9 (2017) Issue 18 . - pp. 5788-5793.
ISSN 2040-3372
DOI: https://doi.org/10.1039/C7NR01530E

Heinke, David ; Kraupner, Alexander ; Eberbeck, Dietmar ; Schmidt, Daniel ; Radon, Patricia ; Uebe, René ; Schüler, Dirk ; Briel, Andreas:
MPS and MRI efficacy of magnetosomes from wild-type and mutant bacterial strains.
In: International Journal on Magnetic Particle Imaging. Vol. 3 (2017) Issue 2 . - 1706004.
ISSN 2365-9033

Barber-Zucker, Shiran ; Uebe, René ; Davidov, Geula ; Navon, Yotam ; Sherf, Dror ; Chill, Jordan H. ; Kass, Itamar ; Bitton, Ronit ; Schüler, Dirk ; Zarivach, Raz:
Disease-Homologous Mutation in the Cation Diffusion Facilitator Protein MamM Causes Single-Domain Structural Loss and Signifies Its Importance.
In: Scientific Reports. Vol. 6 (2016) . - 31933.
ISSN 2045-2322
DOI: https://doi.org/10.1038/srep31933

Raschdorf, Oliver ; Forstner, Yvonne ; Kolinko, Isabel ; Uebe, René ; Plitzko, Jürgen M. ; Schüler, Dirk:
Genetic and ultrastructural analysis reveals the key players and initial steps of bacterial magnetosome membrane biogenesis.
In: PLoS Genetics. Vol. 12 (2016) Issue 6 . - e1006101.
ISSN 1553-7404
DOI: https://doi.org/10.1371/journal.pgen.1006101

Uebe, René ; Schüler, Dirk:
Magnetosome biogenesis in magnetotactic bacteria.
In: Nature Reviews Microbiology. Vol. 14 (2016) Issue 10 . - pp. 621-637.
ISSN 1740-1534
DOI: https://doi.org/10.1038/nrmicro.2016.99

Lohße, Anna ; Kolinko, Isabel ; Raschdorf, Oliver ; Uebe, René ; Borg, Sarah ; Brachmann, Andreas ; Plitzko, Jürgen M. ; Müller, Rolf ; Zhang, Youming ; Schüler, Dirk:
Overproduction of Magnetosomes by Genomic Amplification of Biosynthesis-Related Gene Clusters in a Magnetotactic Bacterium.
In: Applied and Environmental Microbiology. Vol. 82 (2016) Issue 10 . - pp. 3032-3041.
ISSN 1098-5336
DOI: https://doi.org/10.1128/AEM.03860-15

Kumari, Monika ; Hirt, Ann M. ; Uebe, René ; Schüler, Dirk ; Tompa, Éva ; Pósfai, Mihály ; Lorenz, Wolfram ; Ahrentorp, Fredrik ; Jonasson, Christian ; Johansson, Christer:
Experimental mixtures of superparamagnetic and single domain magnetite with respect to Day-Dunlop plots.
In: Geochemistry, Geophysics, Geosystems. Vol. 16 (2015) Issue 6 . - pp. 1739-1752.
ISSN 1525-2027
DOI: https://doi.org/10.1002/2015GC005744

Taukulis, R. ; Widdrat, Marc ; Kumari, M. ; Heinke, D. ; Rumpler, M. ; Tompa, Éva ; Uebe, René ; Kraupner, A. ; Cēbers, A. ; Schüler, Dirk ; Pósfai, M. ; Hirt, A. M. ; Faivre, D.:
Magnetic iron oxide nanoparticles as MRI contrast agents : a comprehensive physical and theoretical study.
In: Magnetohydrodynamics. Vol. 51 (2015) Issue 4 . - pp. 721-748.
ISSN 0024-998X

Zeytuni, Natalie ; Uebe, René ; Maes, Michal ; Davidov, Geula ; Baram, Michal ; Raschdorf, Oliver ; Friedler, Assaf ; Miller, Yifat ; Schüler, Dirk ; Zarivach, Raz:
Bacterial Magnetosome Biomineralization : A Novel Platform to Study Molecular Mechanisms of Human CDF-Related Type-II Diabetes.
In: PLoS One. Vol. 9 (2014) Issue 5 . - e97154.
ISSN 1932-6203
DOI: https://doi.org/10.1371/journal.pone.0097154

Zeytuni, Natalie ; Uebe, René ; Maes, Michal ; Davidov, Geula ; Baram, Michal ; Raschdorf, Oliver ; Nadav-Tsubery, Merav ; Kolusheva, Sofiya ; Bitton, Ronit ; Goobes, Gil ; Friedler, Assaf ; Miller, Yifat ; Schüler, Dirk ; Zarivach, Raz:
Cation Diffusion Facilitators Transport Initiation and Regulation Is Mediated by Cation Induced Conformational Changes of the Cytoplasmic Domain.
In: PLoS One. Vol. 9 (2014) Issue 3 . - e92141.
ISSN 1932-6203
DOI: https://doi.org/10.1371/journal.pone.0092141

Kumari, Monika ; Widdrat, Marc ; Tompa, Éva ; Uebe, René ; Schüler, Dirk ; Pósfai, Mihály ; Faivre, Damien ; Hirt, Ann M.:
Distinguishing magnetic particle size of iron oxide nanoparticles with first-order reversal curves.
In: Journal of Applied Physics. Vol. 116 (2014) . - 124304.
ISSN 1089-7550
DOI: https://doi.org/10.1063/1.4896481

Uebe, René ; Henn, Verena ; Schüler, Dirk:
The MagA Protein of Magnetospirilla Is Not Involved in Bacterial Magnetite Biomineralization.
In: Journal of Bacteriology. Vol. 194 (2012) Issue 5 . - pp. 1018-1023.
ISSN 1098-5530
DOI: https://doi.org/10.1128/JB.06356-11

Uebe, René ; Junge, Katja ; Henn, Verena ; Poxleitner, Gabriele ; Katzmann, Emanuel ; Plitzko, Jürgen M. ; Zarivach, Raz ; Kasama, Takeshi ; Wanner, Gerhard ; Pósfai, Mihály ; Böttger, Lars ; Matzanke, Berthold F. ; Schüler, Dirk:
The cation diffusion facilitator proteins MamB and MamM of Magnetospirillum gryphiswaldense have distinct and complex functions, and are involved in magnetite biomineralization and magnetosome membrane assembly.
In: Molecular Microbiology. Vol. 82 (2011) Issue 4 . - pp. 818-835.
ISSN 1365-2958
DOI: https://doi.org/10.1111/j.1365-2958.2011.07863.x

Uebe, René ; Voigt, Birgit ; Schweder, Thomas ; Albrecht, Dirk ; Katzmann, Emanuel ; Lang, Claus ; Böttger, Lars ; Matzanke, Berthold F. ; Schüler, Dirk:
Deletion of a fur-Like Gene Affects Iron Homeostasis and Magnetosome Formation in Magnetospirillum gryphiswaldense.
In: Journal of Bacteriology. Vol. 192 (2010) Issue 16 . - pp. 4192-4204.
ISSN 1098-5530
DOI: https://doi.org/10.1128/JB.00319-10

Article in a book

Uebe, René ; Schüler, Dirk:
The Formation of Iron Biominerals in Magnetotactic Bacteria.
In: Kroneck, Peter ; Torres, Martha Sosa (ed.): Metals, Microbes, and Minerals : The Biogeochemical Side of Life. - Berlin : De Gruyter , 2021 . - pp. 159-184 . - (Metal Ions in Life Sciences ; 21 )
ISBN 9783110588903
DOI: https://doi.org/10.1515/9783110589771-012

Raschdorf, Oliver ; Schüler, Dirk ; Uebe, René:
Preparation of Bacterial Magnetosomes for Proteome Analysis.
In: Becher, Dörte (ed.): Microbial Proteomics : Methods and Protocols. - New York : Springer , 2018 . - pp. 45-57 . - (Methods in Molecular Biology ; 1841 )
ISBN 978-1-4939-8695-8
DOI: https://doi.org/10.1007/978-1-4939-8695-8_5

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