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Institutionen der Universität Bayreuth
Lehrstuhl Ökologische Mikrobiologie

Universität Bayreuth (59410)
- Fakultäten (55784)
  - Fakultät für Biologie, Chemie und Geowissenschaften (16867)
    - Fachgruppe Biologie (5396)
      - Lehrstuhl Ökologische Mikrobiologie (348)
        Lehrstuhl Ökologische Mikrobiologie - Univ.-Prof. Dr. Tillmann Lüders (124)

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Anzahl der Einträge auf dieser Ebene: 348.

2024

Scholz, Vincent ; Lüders, Tillmann:
Anwendungen der Kabelbakterien in der Umwelt- und Biotechnologie.
In: BIOspektrum. Bd. 30 (2024) Heft 1 . - S. 12-15.
DOI: https://doi.org/10.1007/s12268-024-2076-2

León Ninin, José M. ; Muehe, E. Marie ; Kölbl, Angelika ; Higa Mori, Alejandra ; Nicol, Alan ; Gilfedder, Benjamin Silas ; Pausch, Johanna ; Urbanski, Livia ; Lüders, Tillmann ; Planer-Friedrich, Britta:
Changes in arsenic mobility and speciation across a 2000-year-old paddy soil chronosequence.
In: Science of the Total Environment. Bd. 908 (2024) . - 168351.
DOI: https://doi.org/10.1016/j.scitotenv.2023.168351

Tyborski, Nicolas ; Koehler, Tina ; Steiner, Franziska A. ; Tung, Shu-Yin ; Wild, Andreas J. ; Carminati, Andrea ; Mueller, Carsten W. ; Vidal, Alix ; Wolfrum, Sebastian ; Pausch, Johanna ; Lüders, Tillmann:
Consistent prokaryotic community patterns along the radial root axis of two Zea mays L. landraces across two distinct field locations.
In: Frontiers in Microbiology. Bd. 15 (2024) .
DOI: https://doi.org/10.3389/fmicb.2024.1386476

Meier, Dimitri ; van Grinsven, Sigrid ; Michel, Anja ; Eickenbusch, Philip ; Glombitza, Clemens ; Han, Xingguo ; Fiskal, Annika ; Bernasconi, Stefano ; Schubert, Carsten J. ; Lever, Mark A.:
Hydrogen–independent CO₂ reduction dominates methanogenesis in five temperate lakes that differ in trophic states.
In: ISME Communications. Bd. 4 (2024) Heft 1 . - ycae089.
DOI: https://doi.org/10.1093/ismeco/ycae089

Kanaparthi, Dheeraj ; Lampe, Marko ; Krohn, Jan-Hagen ; Zhu, Baoli ; Hildebrand, Falk ; Boesen, Thomas ; Klingl, Andreas ; Phapale, Prasad ; Lüders, Tillmann:
The reproduction process of Gram-positive protocells.
In: Scientific Reports. Bd. 14 (2024) . - 7075.
DOI: https://doi.org/10.1038/s41598-024-57369-4

Steiner, Franziska A. ; Wild, Andreas J. ; Tyborski, Nicolas ; Tung, Shu‐Yin ; Koehler, Tina ; Buegger, Franz ; Carminati, Andrea ; Eder, Barbara ; Groth, Jennifer ; Hesse, Benjamin D. ; Pausch, Johanna ; Lüders, Tillmann ; Vahl, Wouter K. ; Wolfrum, Sebastian ; Mueller, Carsten W. ; Vidal, Alix:
Rhizosheath drought responsiveness is variety‐specific and a key component of belowground plant adaptation.
In: New Phytologist. Bd. 242 (2024) Heft 2 . - S. 479-492.
DOI: https://doi.org/10.1111/nph.19638

Imminger, Stefanie ; Meier, Dimitri ; Schintlmeister, Arno ; Legin, Anton ; Schnecker, Jörg ; Richter, Andreas ; Gillor, Osnat ; Eichorst, Stephanie A. ; Woebken, Dagmar:
Survival and rapid resuscitation permit limited productivity in desert microbial communities.
In: Nature Communications. Bd. 15 (2024) Heft 1 . - 3056.
DOI: https://doi.org/10.1038/s41467-024-46920-6

Neu, Thomas R. ; Kuhlicke, Ute ; Karwautz, Clemens ; Lüders, Tillmann:
Unique architecture of microbial snottites from a methane driven biofilm revealed by confocal microscopy.
In: Microscopy Research and Technique. Bd. 87 (2024) Heft 2 . - S. 205-213.
DOI: https://doi.org/10.1002/jemt.24422

Wild, Andreas J. ; Steiner, Franziska A. ; Kiene, Marvin ; Tyborski, Nicolas ; Tung, Shu‐Yin ; Köhler, Tina ; Carminati, Andrea ; Eder, Barbara ; Groth, Jennifer ; Vahl, Wouter K. ; Wolfrum, Sebastian ; Lüders, Tillmann ; Laforsch, Christian ; Mueller, Carsten W. ; Vidal, Alix ; Pausch, Johanna:
Unraveling root and rhizosphere traits in temperate maize landraces and modern cultivars : Implications for soil resource acquisition and drought adaptation.
In: Plant, Cell & Environment. Bd. 47 (2024) Heft 7 . - S. 2524-2539.
DOI: https://doi.org/10.1111/pce.14898

2023

Köhler, Tina ; Schaum, Carolin ; Tung, Shu-Yin ; Steiner, Franziska ; Tyborski, Nicolas ; Wild, Andreas J. ; Zebene, Asegidew Akale ; Pausch, Johanna ; Lüders, Tillmann ; Wolfrum, Sebastian ; Mueller, Carsten W. ; Vidal, Alix ; Vahl, Wouter K. ; Groth, Jennifer ; Eder, Barbara ; Ahmed, Mutez Ali ; Carminati, Andrea:
Above and belowground traits impacting transpiration decline during soil drying in 48 maize (Zea mays) genotypes.
In: Annals of Botany. Bd. 131 (2023) Heft 2 . - S. 373-386.
DOI: https://doi.org/10.1093/aob/mcac147

Jakobs, Aileen ; Gürkal, Elif ; Möller, Julia N. ; Löder, Martin G. J. ; Laforsch, Christian ; Lüders, Tillmann:
A novel approach to extract, purify, and fractionate microplastics from environmental matrices by isopycnic ultracentrifugation.
In: Science of the Total Environment. Bd. 857, Part 3 (2023) . - 159610.
DOI: https://doi.org/10.1016/j.scitotenv.2022.159610

Rauscher, Adina ; Meyer, Nele ; Jakobs, Aileen ; Bartnick, Ryan ; Lüders, Tillmann ; Lehndorff, Eva:
Biodegradable microplastic increases CO₂ emission and alters microbial biomass and bacterial community composition in different soil types.
In: Applied Soil Ecology. Bd. 182 (2023) . - 104714.
DOI: https://doi.org/10.1016/j.apsoil.2022.104714

Kanaparthi, Dheeraj ; Lampe, Marko ; Krohn, Jan-Hagen ; Zhu, Baoli ; Klingl, Andreas ; Lüders, Tillmann:
The reproduction of gram-negative protoplasts and the influence of environmental conditions on this process.
In: iScience. Bd. 26 (2023) Heft 11 . - 108149.
DOI: https://doi.org/10.1016/j.isci.2023.108149

2022

Gervers, Kyle A. ; Thomas, Daniel C. ; Roy, Bitty A. ; Spatafora, Joseph W. ; Busby, Posy E.:
Crown closure affects endophytic leaf mycobiome compositional dynamics over time in Pseudotsuga menziesii var. menziesii.
In: Fungal Ecology. Bd. 57-58 (2022) . - 101155.
DOI: https://doi.org/10.1016/j.funeco.2022.101155

Lüders, Tillmann ; Táncsics, András:
The Ecology of Microbial Contaminant Degradation in Groundwater.
In: Mehner, Thomas ; Trockner, Klement (Hrsg.): Encyclopedia of Inland Waters. Volume 3. 2nd Edition. - Amsterdam : Elsevier, 2022 . - S. 428-436
DOI: https://doi.org/10.1016/B978-0-12-819166-8.00180-8

Sachs, Corinna:
Elucidating the role of long-distance electron transfer by cable bacteria in freshwater sediments and contaminated aquifers.
Bayreuth , 2022 . - 141 S.
( Dissertation, 2022 , Universität Bayreuth, Fakultät für Biologie, Chemie und Geowissenschaften)
DOI: https://doi.org/10.15495/EPub_UBT_00006771

Zhu, Baoli ; Karwautz, Clemens ; Andrei, Stefan ; Klingl, Andreas ; Pernthaler, Jakob ; Lüders, Tillmann:
A novel Methylomirabilota methanotroph potentially couples methane oxidation to iodate reduction.
In: mLife. Bd. 1 (2022) Heft 3 . - S. 323-328.
DOI: https://doi.org/10.1002/mlf2.12033

Wang, Zhe ; Jimenez-Fernandez, Oscar ; Osenbrück, Karsten ; Schwientek, Marc ; Schloter, Michael ; Fleckenstein, Jan ; Lüders, Tillmann:
Streambed microbial communities in the transition zone between groundwater and a first-order stream as impacted by bidirectional water exchange.
In: Water Research. Bd. 217 (2022) . - 118334.
DOI: https://doi.org/10.1016/j.watres.2022.118334

Sachs, Corinna ; Kanaparthi, Dheeraj ; Kublik, Susanne ; Szalay, Anna R. ; Schloter, Michael ; Damgaard, Lars Riis ; Schramm, Andreas ; Lüders, Tillmann:
Tracing long-distance electron transfer and cable bacteria in freshwater sediments by agar pillar gradient columns.
In: FEMS Microbiology Ecology. Bd. 98 (2022) Heft 5 . - fiac042.
DOI: https://doi.org/10.1093/femsec/fiac042

Sun, Fengchao ; Mellage, Adrian ; Wang, Zhe ; Bakkour, Rani ; Griebler, Christian ; Thullner, Martin ; Cirpka, Olaf A. ; Elsner, Martin:
Toward Improved Bioremediation Strategies : Response of BAM-Degradation Activity to Concentration and Flow Changes in an Inoculated Bench-Scale Sediment Tank.
In: Environmental Science & Technology. Bd. 56 (2022) Heft 7 . - S. 4050-4061.
DOI: https://doi.org/10.1021/acs.est.1c05259

2021

Szendy, Maik:
Effect of micro biocides on Listeria monocytogenes.
Bayreuth , 2021 . - XXIV, 179 S.
( Dissertation, 2020 , Universität Bayreuth, Fakultät für Biologie, Chemie und Geowissenschaften)
DOI: https://doi.org/10.15495/EPub_UBT_00005265

Fenner, Kathrin ; Elsner, Martin ; Lüders, Tillmann ; McLachlan, Michael S. ; Wackett, Lawrence P. ; Zimmermann, Michael ; Drewes, Jörg E.:
Methodological Advances to Study Contaminant Biotransformation : New Prospects for Understanding and Reducing Environmental Persistence?
In: ACS ES&T Water. Bd. 1 (2021) Heft 7 . - S. 1541-1554.
DOI: https://doi.org/10.1021/acsestwater.1c00025

Jakus, Natalia ; Blackwell, Nia ; Osenbrück, Karsten ; Straub, Daniel ; Byrne, James M. ; Wang, Zhe ; Glöckler, David ; Elsner, Martin ; Lüders, Tillmann ; Grathwohl, Peter ; Kleindienst, Sara ; Kappler, Andreas:
Nitrate removal by a novel lithoautotrophic nitrate-reducing iron(II)-oxidizing culture enriched from a pyrite-rich limestone aquifer.
In: Applied and Environmental Microbiology. Bd. 87 (2021) Heft 16 .
DOI: https://doi.org/10.1128/AEM.00460-21

Möller, Julia N. ; Löder, Martin G. J. ; Freitag, Ruth ; Lehndorff, Eva ; Lüders, Tillmann ; Laforsch, Christian:
Growing plastics : An effort to determine the extent and effects of microplastic pollution in agricultural soils.
In: AWE International. (2021) Heft May . - S. 52-57.

2020

Zhu, Baoli ; Friedrich, Sebastian ; Wang, Zhe ; Táncsics, András ; Lüders, Tillmann:
Availability of Nitrite and Nitrate as Electron Acceptors Modulates Anaerobic Toluene-Degrading Communities in Aquifer Sediments.
In: Frontiers in Microbiology. Bd. 11 (2020) . - 1867.
DOI: https://doi.org/10.3389/fmicb.2020.01867

Táncsics, András ; Farkas, Milán ; Horváth, Balázs ; Maróti, Gergely ; Bradford, Lauren M. ; Lüders, Tillmann ; Kriszt, Balázs:
Genome analysis provides insights into microaerobic toluene-degradation pathway of Zoogloea oleivorans Bucᵀ.
In: Archives of Microbiology. Bd. 202 (2020) . - S. 421-426.
DOI: https://doi.org/10.1007/s00203-019-01743-8

Zeibich, Lydia ; Guhl, Jennifer ; Drake, Harold L.:
Impact of water content and dietary organic carbon richness on gut bacteria in the earthworm Lumbricus terrestris.
In: FEMS Microbes. Bd. 1 (2020) Heft 1 . - xtaa002.
DOI: https://doi.org/10.1093/femsmc/xtaa002

Zhu, Baoli ; Wang, Zhe ; Kanaparthi, Dheeraj ; Kublik, Susanne ; Ge, Tida ; Casper, Peter ; Schloter, Michael ; Lüders, Tillmann:
Long-Read Amplicon Sequencing of Nitric Oxide Dismutase (nod) Genes Reveal Diverse Oxygenic Denitrifiers in Agricultural Soils and Lake Sediments.
In: Microbial Ecology. Bd. 80 (2020) Heft 1 . - S. 243-247.
DOI: https://doi.org/10.15495/EPub_UBT_00005109

Rutere, Cyrus:
Microbial degradation of organic micropollutants in hyporheic zone sediments.
Bayreuth , 2020 . - XVI, 277 S.
( Dissertation, 2020 , Universität Bayreuth, Fakultät für Biologie, Chemie und Geowissenschaften)
DOI: https://doi.org/10.15495/EPub_UBT_00005086

Ramsperger, Anja ; Stellwag, Anja C. ; Caspari, Anja ; Fery, Andreas ; Lüders, Tillmann ; Kress, Holger ; Löder, Martin G. J. ; Laforsch, Christian:
Structural Diversity in Early-Stage Biofilm Formation on Microplastics Depends on Environmental Medium and Polymer Properties.
In: Water. Bd. 12 (2020) Heft 11 . - 3216.
DOI: https://doi.org/10.3390/w12113216

Michas, Antonios ; Harir, Mourad ; Lucio, Marianna ; Vestergaard, Gisle ; Himmelberg, Anne ; Schmitt-Kopplin, Philippe ; Lüders, Tillmann ; Hatzinikolaou, Dimitris G. ; Schöler, Anne ; Rabus, Ralf ; Schloter, Michael:
Sulfate Alters the Competition Among Microbiome Members of Sediments Chronically Exposed to Asphalt.
In: Frontiers in Microbiology. Bd. 11 (2020) . - 556793.
DOI: https://doi.org/10.3389/fmicb.2020.556793

Heuer, Verena B. ; Inagaki, Fumio ; Morono, Yuki ; Kubo, Yusuke ; Spivack, Arthur J. ; Viehweger, Bernhard ; Treude, Tina ; Beulig, Felix ; Schubotz, Florence ; Tonai, Satoshi ; Bowden, Stephen A. ; Cramm, Margaret ; Henkel, Susann ; Hirose, Takehiro ; Homola, Kira ; Hoshino, Tatsuhiko ; Ijiri, Akira ; Imachi, Hiroyuki ; Kamiya, Nana ; Kaneko, Masanori ; Lagostina, Lorenzo ; Manners, Hayley ; McClelland, Harry-Luke ; Metcalfe, Kyle ; Okutsu, Natsumi ; Pan, Donald ; Raudsepp, Maija J. ; Sauvage, Justine ; Tsang, Man-Yin ; Wang, David T. ; Whitaker, Emily ; Yamamoto, Yuzuru ; Yang, Kiho ; Maeda, Lena ; Adhikari, Rishi R. ; Glombitza, Clemens ; Hamada, Yohei ; Kallmeyer, Jens ; Wendt, Jenny ; Wörmer, Lars ; Yamada, Yasuhiro ; Kinoshita, Masataka ; Hinrichs, Kai-Uwe:
Temperature limits to deep subseafloor life in the Nankai Trough subduction zone.
In: Science. Bd. 370 (2020) Heft 6521 . - S. 1230-1234.
DOI: https://doi.org/10.1126/science.abd7934

Sheffer, Monica M. ; Uhl, Gabriele ; Prost, Stefan ; Lüders, Tillmann ; Ulrich, Tim ; Bengtsson, Mia M.:
Tissue- and Population-Level Microbiome Analysis of the Wasp Spider Argiope bruennichi Identified a Novel Dominant Bacterial Symbiont.
In: Microorganisms. Bd. 8 (2020) Heft 1 . - 8.
DOI: https://doi.org/10.3390/microorganisms8010008

2019

Zeibich, Lydia ; Staege, Maraike ; Schmidt, Oliver ; Drake, Harold L.:
Amino acids and ribose : drivers of protein and RNA fermentation by ingested bacteria of a primitive gut ecosystem.
In: Applied and Environmental Microbiology. Bd. 85 (2019) Heft 19 . - e01297-19.
DOI: https://doi.org/10.1128/AEM.01297-19

Kölbl, Angelika ; Bucka, Franziska ; Marschner, Petra ; Mosley, Luke ; Fitzpatrick, Rob ; Schulz, Stefanie ; Lüders, Tillmann ; Kögel-Knabner, Ingrid:
Consumption and alteration of different organic matter sources during remediation of a sandy sulfuric soil.
In: Geoderma. Bd. 347 (2019) . - S. 220-232.
DOI: https://doi.org/10.1016/j.geoderma.2019.04.006

Zeibich, Lydia:
Dietary Biopolymers : Fermentation Potentials of a Primitive Gut Ecosystem.
Bayreuth , 2019 . - XVIII, 337 S.
( Dissertation, 2019 , Universität Bayreuth, Fakultät für Biologie, Chemie und Geowissenschaften)
DOI: https://doi.org/10.15495/EPub_UBT_00004492

Zeibich, Lydia ; Schmidt, Oliver ; Drake, Harold L.:
Dietary Polysaccharides : Fermentation Potentials of a Primitive Gut Ecosystem.
In: Environmental Microbiology. Bd. 21 (2019) Heft 4 . - S. 1436-1451.
DOI: https://doi.org/10.1111/1462-2920.14556

Hünninghaus, Maike ; Dibbern, Dörte ; Kramer, Susanne ; Koller, Robert ; Pausch, Johanna ; Schloter-Hai, Brigitte ; Urich, Tim ; Kandeler, Ellen ; Bonkowski, Michael ; Lüders, Tillmann:
Disentangling carbon flow across microbial kingdoms in the rhizosphere of maize.
In: Soil Biology & Biochemistry. Bd. 134 (2019) . - S. 122-130.
DOI: https://doi.org/10.1016/j.soilbio.2019.03.007

Pilloni, Giovanni ; Bayer, Anne ; Ruth-Anneser, Bettina ; Fillinger, Lucas ; Engel, Marion ; Griebler, Christian ; Lüders, Tillmann:
Dynamics of Hydrology and Anaerobic Hydrocarbon Degrader Communities in A Tar-Oil Contaminated Aquifer.
In: Microorganisms. Bd. 7 (2019) Heft 2 . - 46.
DOI: https://doi.org/10.3390/microorganisms7020046

Zhu, Baoli ; Wang, Jiaqi ; Bradford, Lauren M. ; Ettwig, Katharina ; Hu, Baolan ; Lüders, Tillmann:
Nitric Oxide Dismutase (nod) Genes as a Functional Marker for the Diversity and Phylogeny of Methane-Driven Oxygenic Denitrifiers.
In: Frontiers in Microbiology. Bd. 10 (2019) . - 1577.
DOI: https://doi.org/10.3389/fmicb.2019.01577

Wieczorek, Adam S.:
Trophic interactions of a chitin-degrading microbiome of an aerated agricultural soil.
Bayreuth , 2019 . - XVI, 165 S.
( Dissertation, 2018 , Universität Bayreuth, Fakultät für Biologie, Chemie und Geowissenschaften)
DOI: https://doi.org/10.15495/EPub_UBT_00004457

2018

Morawe, Mareen:
Aerobic Methylotrophic Microorganisms in an Acidic Deciduous Forest Soil : Substrate Range and Effect of pH.
Bayreuth , 2018 . - XVIII, 375 S.
( Dissertation, 2017 , Universität Bayreuth, Fakultät für Biologie, Chemie und Geowissenschaften)

Meier, Anja ; Hunger, Sindy ; Drake, Harold L.:
Differential engagement of fermentative taxa in gut contents of the earthworm Lumbricus terrestris.
In: Applied and Environmental Microbiology. Bd. 84 (2018) Heft 5 . - e01851-17.
DOI: https://doi.org/10.1128/AEM.01851-17

Stott, Matthew ; Lüders, Tillmann:
Editorial : Deep life, kia ora!
In: FEMS Microbiology Ecology. Bd. 94 (2018) Heft 11 . - fiy176.
DOI: https://doi.org/10.1093/femsec/fiy176

Zeibich, Lydia ; Schmidt, Oliver ; Drake, Harold L.:
Fermenters in the Earthworm Gut : Do Transients matter?
In: FEMS Microbiology Ecology. Bd. 95 (2018) Heft 2 . - fiy221.
DOI: https://doi.org/10.1093/femsec/fiy221

Karwautz, Clemens ; Kus, Günter ; Stöckl, Michael ; Neu, Thomas R. ; Lüders, Tillmann:
Microbial megacities fueled by methane oxidation in a mineral spring cave.
In: The ISME Journal. Bd. 12 (2018) . - S. 87-100.
DOI: https://doi.org/10.1038/ismej.2017.146

von Netzer, Frederick ; Granitsiotis, Michael S. ; Szalay, Anna R. ; Lüders, Tillmann:
Next-Generation Sequencing of Functional Marker Genes for Anaerobic Degraders of Petroleum Hydrocarbons in Contaminated Environments.
In: Boll, Matthias (Hrsg.): Anaerobic Utilization of Hydrocarbons, Oils, and Lipids. - Cham : Springer, 2018
DOI: https://doi.org/10.1007/978-3-319-33598-8_15-1

Zeibich, Lydia ; Schmidt, Oliver ; Drake, Harold L.:
Protein- and RNA-Enhanced Fermentation by Gut Microbiota of the Earthworm Lumbricus terrestris.
In: Applied and Environmental Microbiology. Bd. 84 (2018) Heft 11 . - e00657-18.
DOI: https://doi.org/10.1128/AEM.00657-18

Zhang, Lu ; Lehmann, Katharina ; Totsche, Kai Uwe ; Lüders, Tillmann:
Selective successional transport of bacterial populations from rooted agricultural topsoil to deeper layers upon extreme precipitation events.
In: Soil Biology & Biochemistry. Bd. 124 (2018) . - S. 168-178.
DOI: https://doi.org/10.1016/j.soilbio.2018.06.012

Táncsics, András ; Szalay, Anna R. ; Farkas, Milan ; Benedek, Tibor ; Szoboszlay, Sándor ; Szabó, István ; Lüders, Tillmann:
Stable isotope probing of hypoxic toluene degradation at the Siklós aquifer reveals prominent role of Rhodocyclaceae.
In: FEMS Microbiology Ecology. Bd. 94 (2018) Heft 6 . - fiy088.
DOI: https://doi.org/10.1093/femsec/fiy088

Bradford, Lauren M. ; Vestergaard, Gisle ; Táncsics, András ; Zhu, Baoli ; Schloter, Michael ; Lüders, Tillmann:
Transcriptome-Stable Isotope Probing Provides Targeted Functional and Taxonomic Insights Into Microaerobic Pollutant-Degrading Aquifer Microbiota.
In: Frontiers in Microbiology. Bd. 9 (2018) . - 2696.
DOI: https://doi.org/10.3389/fmicb.2018.02696

Lüders, Tillmann:
Untersuchung prozessrelevanter mikrobieller Populationen mittels RNA-SIP.
In: BIOspektrum. Bd. 24 (2018) Heft 3 . - S. 264-266.
DOI: https://doi.org/10.1007/s12268-018-0917-6

2017

Uksa, Marie ; Buegger, Franz ; Gschwendtner, Silvia ; Lüders, Tillmann ; Kublik, Susanne ; Kautz, Timo ; Athmann, Miriam ; Köpke, Ulrich ; Munch, Jean Charles ; Schloter, Michael ; Fischer, Doreen:
Bacteria utilizing plant-derived carbon in the rhizosphere of Triticum aestivum change in different depths of an arable soil.
In: Environmental Microbiology Reports. Bd. 9 (2017) Heft 6 . - S. 729-741.
DOI: https://doi.org/10.1111/1758-2229.12588

Lüders, Tillmann:
DNA- and RNA-Based Stable Isotope Probing of Hydrocarbon Degraders.
In: McGenity, Terry J. (Hrsg.): Hydrocarbon and Lipid Microbiology Protocols : Genetic, Genomic and System Analyses of Communities. - Berlin : Springer, 2017 . - S. 181-197
DOI: https://doi.org/10.1007/8623_2015_74

Lüders, Tillmann:
The ecology of anaerobic degraders of BTEX hydrocarbons in aquifers.
In: FEMS Microbiology Ecology. Bd. 93 (2017) Heft 1 . - fiw220.
DOI: https://doi.org/10.1093/femsec/fiw220

Cardinale, Massimiliano ; Kaiser, Dominik ; Lüders, Tillmann ; Schnell, Sylvia ; Egert, Markus:
Microbiome analysis and confocal microscopy of used kitchen sponges reveal massive colonization by Acinetobacter, Moraxella and Chryseobacterium species.
In: Scientific Reports. Bd. 7 (2017) . - 5791.
DOI: https://doi.org/10.1038/s41598-017-06055-9

Zhang, Lu ; Lüders, Tillmann:
Micropredator niche differentiation between bulk soil and rhizosphere of an agricultural soil depends on bacterial prey.
In: FEMS Microbiology Ecology. Bd. 93 (2017) Heft 9 . - fix103.
DOI: https://doi.org/10.1093/femsec/fix103

Wu, Xiaofei ; Jiang, Ping ; Razinskas, Gary ; Huo, Yongheng ; Zhang, Hongyi ; Kamp, Martin ; Rastelli, Armando ; Schmidt, Oliver G. ; Hecht, Bert ; Lindfors, Klas ; Lippitz, Markus:
On-Chip Single-Plasmon Nanocircuit Driven by a Self-Assembled Quantum Dot.
In: Nano Letters. Bd. 17 (2017) Heft 7 . - S. 4291-4296.
DOI: https://doi.org/10.1021/acs.nanolett.7b01284

Herzyk, Agnieszka ; Fillinger, Lucas ; Larentis, Michael ; Qiu, Shiran ; Maloszewski, Piotr ; Hünniger, Marko ; Schmidt, Susanne I. ; Stumpp, Christine ; Marozava, Sviatlana ; Knappett, Peter S. K. ; Elsner, Martin ; Meckenstock, Rainer U. ; Lüders, Tillmann ; Griebler, Christian:
Response and recovery of a pristine groundwater ecosystem impacted by toluene contamination : A meso-scale indoor aquifer experiment.
In: Journal of Contaminant Hydrology. Bd. 207 (2017) . - S. 17-30.
DOI: https://doi.org/10.1016/j.jconhyd.2017.10.004

Zhu, Baoli ; Bradford, Lauren ; Huang, Sichao ; Szalay, Anna R. ; Leix, Carmen ; Weissbach, Max ; Táncsics, András ; Drewes, Jörg E. ; Lüders, Tillmann:
Unexpected Diversity and High Abundance of Putative Nitric Oxide Dismutase (Nod) Genes in Contaminated Aquifers and Wastewater Treatment Systems.
In: Applied and Environmental Microbiology. Bd. 83 (2017) Heft 4 . - e02750-16.
DOI: https://doi.org/10.1128/aem.02750-16

2016

Boeker, Carolin ; Lüders, Tillmann ; Müller, Melanie ; Pander, Joachim ; Geist, Jürgen:
Alteration of physico-chemical and microbial properties in freshwater substrates by burrowing invertebrates.
In: Limnologica. Bd. 59 (2016) . - S. 131-139.
DOI: https://doi.org/10.1016/j.limno.2016.05.007

Rabus, Ralf ; Boll, Matthias ; Heider, Johann ; Meckenstock, Rainer U. ; Buckel, Wolfgang ; Einsle, O. ; Ermler, U. ; Golding, B. T. ; Gunsalus, R. P. ; Kroneck, P. M. H. ; Krüger, Martin ; Lüders, Tillmann ; Martins, B. M. ; Musat, Florin ; Richnow, Hans-Hermann ; Schink, Bernhard ; Seifert, Jana ; Szaleniec, M. ; Treude, Tina ; Ullmann, G. Matthias ; Vogt, Carsten ; von Bergen, Martin ; Wilkes, Heinz:
Anaerobic microbial degradation of hydrocarbons : from enzymatic reactions to the environment.
In: Journal of Molecular Microbiology and Biotechnology. Bd. 26 (2016) Heft 1-3 . - S. 5-28.
DOI: https://doi.org/10.1159/000443997

Borken, Werner ; Horn, Marcus A. ; Geimer, Stefan ; Bahamonde Aguilar, Nelson A. ; Knorr, Klaus-Holger:
Associative nitrogen fixation in nodules of the conifer Lepidothamnus fonkii (Podocarpaceae) inhabiting ombrotrophic bogs in southern Patagonia.
In: Scientific Reports. Bd. 6 (2016) . - 39072.
DOI: https://doi.org/10.1038/srep39072

Chaignaud, Pauline:
Bacteria as chloromethane sinks – from model strains to forest soil communities = Le rôle des bactéries dans le filtrage du chlorométhane, un gaz destructeur de la couche d’ozone – des souches modèles aux communautés microbiennes de sols forestiers.
Bayreuth , 2016 . - 285 S.
( Dissertation, 2016 , Universität Bayreuth, Bayreuther Graduiertenschule für Mathematik und Naturwissenschaften - BayNAT)

Braga, Lucas P. P. ; Yoshiura, Caio A. ; Borges, Clovis D. ; Horn, Marcus A. ; Brown, George G. ; Drake, Harold L. ; Tsai, Siu M.:
Disentangling the influence of earthworms in sugarcrane rhizosphere.
In: Scientific Reports. Bd. 6 (2016) . - 38923.
DOI: https://doi.org/10.1038/srep38923

Richnow, Hans-Hermann ; Lüders, Tillmann:
Editorial overview : Probing environmental processes and microbiome functions using stable isotopes as smart tracers in analytical biotechnology.
In: Current Opinion in Biotechnology. Bd. 41 (2016) . - S. iv-vii.
DOI: https://doi.org/10.1016/j.copbio.2016.09.002

Casadevall, Arturo ; Bertuzzi, Stefano ; Buchmeier, Michael J. ; Davis, Roger J ; Drake, Harold L. ; Fang, Ferric C. ; Gilbert, Jack ; Goldman, Barbara M. ; Imperiale, Michael J. ; Matsumura, Philip ; McAdam, Alexander J. ; Pasetti, Marcela F. ; Sandri-Goldin, Rozanne M. ; Silhavy, Thomas ; Rice, Louis ; Young, Jo-Anne H. ; Shenk, Thomas:
Editorial: ASM journals eliminate impact factor information from journal websites.
In: mBio. Bd. 7 (2016) Heft 4 . - e01150-16.
DOI: https://doi.org/10.1128/mBio.01150-16

Hunger, Sindy ; Schmidt, Oliver G. ; Gößner, Anita S. ; Drake, Harold L.:
Formate-derived H2, a driver of hydrogenotrophic processes in the root-zone of a methane-emitting fen.
In: Environmental Microbiology. Bd. 18 (2016) Heft 9 . - S. 3106-3119.
DOI: https://doi.org/10.1111/1462-2920.13301

von Netzer, Frederick ; Kuntze, K. ; Vogt, Carsten ; Richnow, Hans-Hermann ; Boll, Matthias ; Lüders, Tillmann:
Functional gene markers for fumarate-adding and dearomatizing key enzymes in anaerobic aromatic hydrocarbon degradation in terrestrial environments.
In: Journal of Molecular Microbiology and Biotechnology. Bd. 26 (2016) Heft 1-3 . - S. 180-194.
DOI: https://doi.org/10.1159/000441946

Hunger, Sindy:
Functional Redundancy of Anaerobes in Methanogenic Food Webs.
Bayreuth , 2016 . - XVIII, 311 S.
( Dissertation, 2016 , Universität Bayreuth, Fakultät für Biologie, Chemie und Geowissenschaften)

Schmidt, Oliver:
Hydrogen Metabolizers : Drivers of Anaerobic Degradation Processes in Peatlands and Earthworm Guts.
Bayreuth , 2016 . - XII, 230 S.
( Dissertation, 2016 , Universität Bayreuth, Fakultät für Biologie, Chemie und Geowissenschaften)

Müller, Hubert ; Bosch, Julian ; Griebler, Christian ; Damgaard, Lars Riis ; Nielsen, Lars Peter ; Lüders, Tillmann ; Meckenstock, Rainer U.:
Long-distance electron transfer by cable bacteria in aquifer sediments.
In: The ISME Journal. Bd. 10 (2016) . - S. 2010-2019.
DOI: https://doi.org/10.1038/ismej.2015.250

Dallinger, Anja:
Mikrobieller Metabolismus von 2,4-Dichlorphenol in der Drilosphäre und Einfluss auf die N2O-Bildung : Verknüpfung von Prozessen mit Populationen.
Bayreuth , 2016 . - XXI, 330 S.
( Dissertation, 2015 , Universität Bayreuth, Fakultät für Biologie, Chemie und Geowissenschaften)

Selzer, Mirjam:
Nitratreduktion, Denitrifikation und Dissimilatorische Nitritreduktion zu Ammonium in Grünland- und Waldböden : Populationen und Einflussfaktoren.
Bayreuth , 2016 . - XVI, 260 S.
( Dissertation, 2016 , Universität Bayreuth, Fakultät für Biologie, Chemie und Geowissenschaften)

Gschwendtner, Silvia ; Engel, Marion ; Lüders, Tillmann ; Buegger, Franz ; Schloter, Michael:
Nitrogen fertilization affects bacteria utilizing plant-derived carbon in the rhizosphere of beech seedlings.
In: Plant and Soil. Bd. 407 (2016) Heft 1-2 . - S. 203-215.
DOI: https://doi.org/10.1007/s11104-016-2888-z

Schmidt, Oliver G. ; Hink, Linda ; Horn, Marcus A. ; Drake, Harold L.:
Peat : home to novel syntrophic species that feed acetate- and hydrogen-scavenging methanogens.
In: The ISME Journal. Bd. 10 (2016) Heft 8 . - S. 1954-1966.
DOI: https://doi.org/10.1038/ismej.2015.256

Griebler, Christian ; Brielmann, Heike ; Haberer, Christina M. ; Kaschuba, Sigrid ; Kellermann, Claudia ; Stumpp, Christine ; Hegler, Florian ; Kuntz, David ; Walker-Hertkorn, Simone ; Lüders, Tillmann:
Potential impacts of geothermal energy use and storage of heat on groundwater quality, biodiversity, and ecosystem processes.
In: Environmental Earth Sciences. Bd. 75 (2016) . - 1391.
DOI: https://doi.org/10.1007/s12665-016-6207-z

Kramer, Susanne ; Dibbern, Dörte ; Moll, Julia ; Hünninghaus, Maike ; Koller, Robert ; Krüger, Dirk ; Marhan, Sven ; Urich, Tim ; Wubet, Tesfaye ; Bonkowski, Michael ; Buscot, François ; Lüders, Tillmann ; Kandeler, Ellen:
Resource partitioning between bacteria, fungi, and protists in the detritusphere of an agricultural soil.
In: Frontiers in Microbiology. Bd. 7 (2016) . - 1524.
DOI: https://doi.org/10.3389/fmicb.2016.01524

Lüders, Tillmann ; Dumont, Marc G. ; Bradford, Lauren ; Manefield, Mike:
RNA-stable isotope probing : from carbon flow within key microbiota to targeted transcriptomes.
In: Current Opinion in Biotechnology. Bd. 41 (2016) . - S. 83-89.
DOI: https://doi.org/10.1016/j.copbio.2016.05.001

Vogt, Carsten ; Lüders, Tillmann ; Richnow, Hans-Hermann ; Krüger, Martin ; von Bergen, Martin ; Seifert, Jana:
Stable isotope probing approaches to study anaerobic hydrocarbon degradation and degraders.
In: Journal of Molecular Microbiology and Biotechnology. Bd. 26 (2016) Heft 1-3 . - S. 195-210.
DOI: https://doi.org/10.1159/000440806

2015

Hunger, Sindy ; Gößner, Anita S. ; Drake, Harold L.:
Anaerobic trophic interactions of contrasting methane-emitting mire soils : processes versus taxa.
In: FEMS Microbiology Ecology. Bd. 91 (2015) Heft 5 . - S. 1-14.
DOI: https://doi.org/10.1093/femsec/fiv045

Meckenstock, Rainer U. ; Elsner, Martin ; Griebler, Christian ; Lüders, Tillmann ; Stumpp, Christine ; Aamand, Jens ; Agathos, Spiros N. ; Albrechtsen, Hans-Jørgen ; Bastiaens, Leen ; Bjerg, Poul L. ; Boon, Nico ; Dejonghe, Winnie ; Huang, Wei E. ; Schmidt, Susanne I. ; Smolders, Erik ; Sørensen, Sebastian R. ; Springael, Dirk ; van Breukelen, Boris M.:
Biodegradation : updating the concepts of control for microbial cleanup in contaminated aquifers.
In: Environmental Science & Technology. Bd. 49 (2015) Heft 12 . - S. 7073-7081.
DOI: https://doi.org/10.1021/acs.est.5b00715

Palmer, Katharina ; Horn, Marcus A.:
Denitrification activity of a remarkably diverse fen denitrifier community in Finnish Lapland is N-Oxide limited.
In: PLoS One. Bd. 10 (2015) Heft 4 . - e0123123.
DOI: https://doi.org/10.1371/journal.pone.0123123

Drake, Harold L.:
Editorial: PilZ Domain Proteins of the Plant Pathogen Xanthomonas oryzae pv. oryzae Function Differentially in Virulence.
In: Applied and Environmental Microbiology. Bd. 81 (2015) Heft 13 . - S. 4233-4234.
DOI: https://doi.org/10.1128/AEM.01322-15

Kubryk, Patrick ; Kölschbach, Janina S. ; Marozava, Sviatlana ; Lüders, Tillmann ; Meckenstock, Rainer U. ; Niessner, Reinhard ; Ivleva, Natalia P.:
Exploring the Potential of Stable Isotope (Resonance) Raman Microspectroscopy and Surface-Enhanced Raman Scattering for the Analysis of Microorganisms at Single Cell Level.
In: Analytical Chemistry. Bd. 87 (2015) Heft 13 . - S. 6622-6630.
DOI: https://doi.org/10.1021/acs.analchem.5b00673

Schulz, Kristin ; Hunger, Sindy ; Brown, George G. ; Tsai, Siu M. ; Cerri, Carlos C. ; Conrad, Ralf ; Drake, Harold L.:
Methanogenic food web in gut contents of the methane-emitting earthworm Eudrilus eugeniae from Brazil.
In: The ISME Journal. Bd. 9 (2015) Heft 8 . - S. 1778-1792.
DOI: https://doi.org/10.1038/ismej.2014.262

Gründger, Friederike ; Jiménez, Núria ; Thielemann, Thomas ; Straaten, Nontje ; Lüders, Tillmann ; Richnow, Hans-Hermann ; Krüger, Martin:
Microbial methane formation in deep aquifers of a coal-bearing sedimentary basin, Germany.
In: Frontiers in Microbiology. Bd. 6 (2015) . - 200.
DOI: https://doi.org/10.3389/fmicb.2015.00200

Höss, Sebastian ; Frank-Fahle, Béatrice ; Lüders, Tillmann ; Traunspurger, Walter:
Response of bacteria and meiofauna to iron oxide colloids in sediments of freshwater microcosms.
In: Environmental Toxicology and Chemistry. Bd. 34 (2015) Heft 11 . - S. 2660-2669.
DOI: https://doi.org/10.1002/etc.3091

Rühle, Franziska A. ; von Netzer, Frederick ; Lüders, Tillmann ; Stumpp, Christine:
Response of Transport Parameters and Sediment Microbiota to Water Table Fluctuations in Laboratory Columns.
In: Vadose Zone Journal. Bd. 14 (2015) Heft 5 .
DOI: https://doi.org/10.2136/vzj2014.09.0116

Pfannes, Kristina R. ; Langenbach, Kilian M. W. ; Pilloni, Giovanni ; Stührmann, Torben ; Euringer, Kathrin ; Lüders, Tillmann ; Neu, Thomas R. ; Müller, Jochen A. ; Kästner, Matthias ; Meckenstock, Rainer U.:
Selective elimination of bacterial faecal indicators in the Schmutzdecke of slow sand filtration columns.
In: Applied Microbiology and Biotechnology. Bd. 99 (2015) Heft 23 . - S. 10323-10332.
DOI: https://doi.org/10.1007/s00253-015-6882-9

Einsiedl, Florian ; Pilloni, Giovanni ; Ruth-Anneser, Bettina ; Lüders, Tillmann ; Griebler, Christian:
Spatial distributions of sulphur species and sulphate-reducing bacteria provide insights into sulphur redox cycling and biodegradation hot-spots in a hydrocarbon-contaminated aquifer.
In: Geochimica et Cosmochimica Acta. Bd. 156 (2015) . - S. 207-221.
DOI: https://doi.org/10.1016/j.gca.2015.01.014

Schmidt, Oliver ; Horn, Marcus A. ; Kolb, Steffen ; Drake, Harold L.:
Temperature impacts differentially on the methanogenic food web of cellulose-supplemented peatland soil.
In: Environmental Microbiology. Bd. 17 (2015) Heft 3 . - S. 720-734.
DOI: https://doi.org/10.1111/1462-2920.12507

2014

Dallinger, Anja ; Horn, Marcus A.:
Agricultural soil and drilosphere as reservoirs of new and unusual ssimilators of 2,4-Dichlorophenol Carbon.
In: Environmental Microbiology. Bd. 16 (2014) Heft 1 . - S. 84-100.
DOI: https://doi.org/10.1111/1462-2920.12209

Elsner, Martin ; Griebler, Christian ; Lüders, Tillmann ; Meckenstock, Rainer U.:
Assessing microbial activity and degradation pathways in the environment by measuring naturally occurring stable isotopes in organic compounds.
In: Applications of Molecular Microbiological Methods. - Norfolk : Caister Academic Press, 2014

Stroganov, Vladislav ; Zakharchenko, Svetlana ; Sperling, Evgeni ; Meyer, Anne K. ; Schmidt, Oliver G. ; Ionov, Leonid:
Biodegradable Self-Folding Polymer Films with Controlled Thermo-Triggered Folding.
In: Advanced Functional Materials. Bd. 24 (2014) Heft 27 . - S. 4357-4363.
DOI: https://doi.org/10.1002/adfm.201400176

Härtig, Cornelia ; Lohmayer, Regina ; Kolb, Steffen ; Horn, Marcus A. ; Inskeep, William P. ; Planer-Friedrich, Britta:
Chemolithotrophic Growth of the Aerobic Hyperthermophilic Bacterium Thermocrinis ruber OC 14/7/2 on Monothioarsenate and Arsenite.
In: FEMS Microbiology Ecology. Bd. 90 (2014) Heft 3 . - S. 747-760.
DOI: https://doi.org/10.1111/1574-6941.12431

Kleindienst, Sara ; Herbst, Florian-Alexander ; Stagars, Marion ; von Netzer, Frederick ; von Bergen, Martin ; Seifert, Jana ; Peplies, Jörg ; Amann, Rudolf ; Musat, Florin ; Lüders, Tillmann ; Knittel, Katrin:
Diverse sulfate-reducing bacteria of the Desulfosarcina/Desulfococcus clade are the key alkane degraders at marine seeps.
In: The ISME Journal. Bd. 8 (2014) . - S. 2029-2044.
DOI: https://doi.org/10.1038/ismej.2014.51

Arango, Laura ; Buddrus-Schiemann, Katharina ; Opelt, Katja ; Lüders, Tillmann ; Haesler, Felix ; Schmid, Michael ; Ernst, Dieter ; Hartmann, Anton:
Effects of glyphosate on the bacterial community associated with roots of transgenic Roundup Ready® soybean.
In: European Journal of Soil Biology. Bd. 63 (2014) . - S. 41-48.
DOI: https://doi.org/10.1016/j.ejsobi.2014.05.005

Drake, Harold L.:
The genus Lactovum.
In: Holzapfel, Wilhelm H. (Hrsg.): Lactic Acid Bacteria : Biodiversity and Taxonomy. - Chichester : Wiley, 2014 . - S. 447-455

Karwautz, Clemens ; Lüders, Tillmann:
Impact of hydraulic well restoration on native bacterial communities in drinking water wells.
In: Microbes and Environments. Bd. 29 (2014) Heft 4 . - S. 363-369.
DOI: https://doi.org/10.1264/jsme2.ME14035

Stacheter, Astrid:
Methanoloxidation in oxischen Böden und Umweltparameter assoziierter methylotropher Mikroorganismen-Gemeinschaften.
Bayreuth , 2014 . - XII, 194 S.
( Dissertation, 2013 , Universität Bayreuth, Fakultät für Biologie, Chemie und Geowissenschaften)

Wieczorek, Adam S. ; Hetz, Stefanie ; Kolb, Steffen:
Microbial responses to chitin and chitosan in oxic and anoxic agricultural soil slurries.
In: Biogeosciences. Bd. 11 (2014) Heft 12 . - S. 3339-3352.
DOI: https://doi.org/10.5194/bg-11-3339-2014

Kuppardt, Anke ; Kleinsteuber, S. ; Vogt, Carsten ; Lüders, Tillmann ; Harms, H. ; Chatzinotas, Antonis:
Phylogenetic and functional diversity within toluene-degrading, sulphate-reducing consortia enriched from a contaminated aquifer.
In: Microbial Ecology. Bd. 68 (2014) Heft 2 . - S. 222-234.
DOI: https://doi.org/10.1007/s00248-014-0403-8

Lüders, Tillmann ; von Netzer, Frederick:
Primers : Functional genes for anaerobic hydrocarbon degrading microbes.
In: McGenity, Terry J. (Hrsg.): Hydrocarbon and Lipid Microbiology Protocols : Primers. - Berlin : Springer, 2014 . - S. 39-55
DOI: https://doi.org/10.1007/8623_2014_44

Dibbern, Dörte ; Schmalwasser, Andreas ; Lüders, Tillmann ; Totsche, Kai Uwe:
Selective transport of plant root-associated bacterial populations in agricultural soils upon snowmelt.
In: Soil Biology & Biochemistry. Bd. 69 (2014) . - S. 187-196.
DOI: https://doi.org/10.1016/j.soilbio.2013.10.040

Meckenstock, Rainer U. ; von Netzer, Frederick ; Stumpp, Christine ; Lüders, Tillmann ; Himmelberg, Anne M. ; Hertkorn, Norbert ; Schmitt-Kopplin, Philippe ; Harir, Mourad ; Hosein, Riad ; Haque, Shirin ; Schulze-Makuch, Dirk:
Water droplets in oil are microhabitats for microbial life.
In: Science. Bd. 345 (2014) Heft 6197 . - S. 673-676.
DOI: https://doi.org/10.1126/science.1252215

2013

Drake, Harold L. ; Küsel, Kirsten ; Matthies, Carola:
Acetogenic prokaryotes.
In: Rosenberg, Eugene (Hrsg.): The Prokaryotes: Prokaryotic physiology and biochemistry. - Berlin : Springer, 2013 . - S. 3-60

Chatzinotas, Antonis ; Schellenberger, Stefanie ; Glaser, Karin ; Kolb, Steffen:
Assimilation of cellulose-derived carbon by microeukaryotes in oxic and anoxic slurries of an aerated soil.
In: Applied and Environmental Microbiology. Bd. 79 (2013) Heft 18 . - S. 5777-5781.
DOI: https://doi.org/10.1128/AEM.01598-13

Liu, Ya-Jun ; Liu, Shuang-Jiang ; Drake, Harold L. ; Horn, Marcus A.:
Consumers of 4‐chloro‐2‐methylphenoxyacetic acid from agricultural soil and drilosphere harbor cadA, r/sdpA, and tfdA‐like gene encoding oxygenases.
In: FEMS Microbiology Ecology. Bd. 86 (2013) Heft 1 . - S. 114-129.
DOI: https://doi.org/10.1111/1574-6941.12144

Rasche, Frank ; Schloter, Michael ; Lüders, Tillmann ; Sessitsch, Angela:
DNA-based stable isotope probing for identifying active bacterial endophytes in potato.
In: de Bruijn, Frans J. (Hrsg.): Molecular Microbial Ecology of the Rhizosphere. Volume 1. - Hoboken, NJ : Wiley-Blackwell, 2013 . - S. 413-421
DOI: https://doi.org/10.1002/9781118297674.ch38

Müller, Melanie ; Pander, Joachim ; Wild, Romy ; Lüders, Tillmann ; Geist, Jürgen:
The effects of stream substratum texture on interstitial conditions and bacterial biofilms : Methodological strategies.
In: Limnologica. Bd. 43 (2013) Heft 2 . - S. 106-113.
DOI: https://doi.org/10.1016/j.limno.2012.08.002

Depkat-Jakob, Peter ; Brown, George G. ; Tsai, Siu M. ; Horn, Marcus A. ; Drake, Harold L.:
Emission of nitrous oxide and dinitrogen by diverse earthworm families from Brazil and resolution of associated denitrifying and nitrate-dissimilating taxa.
In: FEMS Microbiology Ecology. Bd. 83 (2013) Heft 2 . - S. 375-391.
DOI: https://doi.org/10.1111/j.1574-6941.2012.01476.x

von Netzer, Frederick ; Pilloni, Giovanni ; Kleindienst, Sara ; Krüger, Martin ; Knittel, Katrin ; Gründger, Friederike ; Lüders, Tillmann:
Enhanced Gene Detection Assays for Fumarate-Adding Enzymes Allow Uncovering of Anaerobic Hydrocarbon Degraders in Terrestrial and Marine Systems.
In: Applied and Environmental Microbiology. Bd. 79 (2013) Heft 2 . - S. 543-552.
DOI: https://doi.org/10.1128/aem.02362-12

Larentis, Michael ; Hörmann, Katrin ; Lüders, Tillmann:
Fine-scale degrader community profiling over an aerobic/anaerobic redox gradient in a toluene-contaminated aquifer.
In: Environmental Microbiology Reports. Bd. 5 (2013) Heft 2 . - S. 225-234.
DOI: https://doi.org/10.1111/1758-2229.12004

Stacheter, Astrid ; Noll, Matthias ; Lee, Charles K. ; Selzer, Mirjam ; Glowik, Beate ; Ebertsch, Linda ; Mertel, Ralf ; Schulz, Daria ; Lampert, Niclas ; Drake, Harold L. ; Kolb, Steffen:
Methanol oxidation by temperate soils and environmental determinants of associated methylotrophs.
In: The ISME Journal. Bd. 7 (2013) Heft 5 . - S. 1051-1064.
DOI: https://doi.org/10.1038/ismej.2012.167

Antony, Chakkiath Paul ; Kumaresan, Deepak ; Hunger, Sindy ; Drake, Harold L. ; Murrell, J. Collin ; Shouche, Yogesh S.:
Microbiology of Lonar Lake and other soda lakes.
In: The ISME Journal. Bd. 7 (2013) Heft 3 . - S. 468-476.
DOI: https://doi.org/10.1038/ismej.2012.137

Kolb, Steffen ; Stacheter, Astrid:
Prerequisites for amplicon pyrosequencing of microbial methanol utilizers in the environment.
In: Frontiers in Microbiology. Bd. 4 (2013) . - 268.
DOI: https://doi.org/10.3389/fmicb.2013.00268

Ditterich, Franziska ; Poll, Christian ; Pagel, Holger ; Babin, Doreen ; Smalla, Kornelia ; Horn, Marcus A. ; Streck, Thilo ; Kandeler, Ellen:
Succession of bacterial and fungal 4-chloro-2-methylphenoxyacetic acid degraders at the soil-litter interface.
In: FEMS Microbiology Ecology. Bd. 86 (2013) Heft 1 . - S. 85-100.
DOI: https://doi.org/10.1111/1574-6941.12131

2012

Palmer, Katharina ; Horn, Marcus A.:
Actinobacterial nitrate reducers and Proteobacterial denitrifiers are abundant in N2O-metabolizing palsa peat.
In: Applied and Environmental Microbiology. Bd. 78 (2012) Heft 16 . - S. 5584-5596.
DOI: https://doi.org/10.1128/AEM.00810-12

Palmer, Katharina ; Biasi, Christina ; Horn, Marcus A.:
Contrasting denitrifier communities relate to contrasting N2O emission patterns from acidic peat soils in arctic tundra.
In: The ISME Journal. Bd. 6 (2012) Heft 5 . - S. 1058-1077.
DOI: https://doi.org/10.1038/ismej.2011.172

Khadem, Ahmad F. ; Wieczorek, Adam S. ; Pol, Arjan ; Vuilleumier, Stéphane ; Harhangi, Harry R. ; Dunfield, Peter F. ; Kalyuzhnaya, Marina G. ; Murrell, J. Collin ; Francoijs, Kees-Jan ; Stunnenberg, Henk G. ; Stein, Lisa Y. ; di Spirito, Alan A. ; Semrau, Jeremy D. ; Lajus, Aurélie ; Médigue, Claudine ; Klotz, Martin G. ; Jetten, Mike S. M. ; op den Camp, Huub J. M.:
Draft genome sequence of the volcano-inhabiting thermoacidophilic methanotroph Methylacidiphilum fumariolicum strain SolV.
In: Journal of Bacteriology. Bd. 194 (2012) Heft 14 . - S. 3729-3730.
DOI: https://doi.org/10.1128/JB.00501-12

Scharroba, Anika ; Dibbern, Dörte ; Hünninghaus, Maike ; Kramer, Susanne ; Moll, Julia ; Butenschön, Olaf ; Bonkowski, Michael ; Buscot, Francois ; Kandeler, Ellen ; Koller, Robert ; Krüger, Dirk ; Lüders, Tillmann ; Scheu, Stefan ; Rueß, Liliane:
Effects of resource availability and quality on the structure of the micro-food web of an arable soil across depth.
In: Soil Biology & Biochemistry. Bd. 50 (2012) . - S. 1-11.
DOI: https://doi.org/10.1016/j.soilbio.2012.03.002

Depkat-Jakob, Peter ; Hunger, Sindy ; Schulz, Kristin ; Brown, George G. ; Tsai, Siu M. ; Drake, Harold L.:
Emission of methane by Eudrilus eugeniae and other earthworms from Brazil.
In: Applied and Environmental Microbiology. Bd. 78 (2012) Heft 8 . - S. 3014-3019.
DOI: https://doi.org/10.1128/AEM.07949-11

Graue, Jutta ; Kleindienst, Sara ; Lüders, Tillmann ; Cypionka, Heribert ; Engelen, Bert:
Identifying fermenting bacteria in anoxic tidal-flat sediments by a combination of microcalorimetry and ribosome-based stable-isotope probing.
In: FEMS Microbiology Ecology. Bd. 81 (2012) Heft 1 . - S. 78-87.
DOI: https://doi.org/10.1111/j.1574-6941.2011.01282.x

Schellenberger, Stefanie ; Drake, Harold L. ; Kolb, Steffen:
Impairment of cellulose- and cellobiose-degrading soil Bacteria by two acidic herbicides.
In: FEMS Microbiology Letters. Bd. 327 (2012) Heft 1 . - S. 60-65.
DOI: https://doi.org/10.1111/j.1574-6968.2011.02460.x

Lüders, Tillmann ; Griebler, Christian ; Häggblom, Max:
Subsurface microbiology : the life below our feet.
In: FEMS Microbiology Ecology. Bd. 81 (2012) Heft 1 . - S. 1.
DOI: https://doi.org/10.1111/j.1574-6941.2012.01399.x

Pilloni, Giovanni ; Granitsiotis, Michael S. ; Engel, Marion ; Lüders, Tillmann:
Testing the limits of 454 pyrotag sequencing : reproducibility, quantitative assessment and comparison to T-RFLP fingerprinting of aquifer microbes.
In: PLoS One. Bd. 7 (2012) Heft 7 . - e40467.
DOI: https://doi.org/10.1371/journal.pone.0040467

Kolb, Steffen ; Horn, Marcus A.:
Microbial CH₄ and N₂O consumption in acidic wetlands.
In: Frontiers in Microbiology. Bd. 3 (2012) . - 78.
DOI: https://doi.org/10.3389/fmicb.2012.00078

2011

Küsel, Kirsten ; Drake, Harold L.:
Acetogens.
In: Reitner, Joachim; Thiel, Volker (Hrsg.): Encyclopedia of Geobiology. - Dordrecht : Springer, 2011 . - S. 1-5

Beckmann, Sabrina ; Lüders, Tillmann ; Krüger, Martin ; von Netzer, Frederick ; Engelen, Bert ; Cypionka, Heribert:
Acetogens and Acetoclastic Methanosarcinales Govern Methane Formation in Abandoned Coal Mines.
In: Applied and Environmental Microbiology. Bd. 77 (2011) Heft 11 . - S. 3749-3756.
DOI: https://doi.org/10.1128/aem.02818-10

Liu, Ya-Jun ; Liu, Shuang-Jiang ; Drake, Harold L. ; Horn, Marcus A.:
Alphaproteobacteria dominate active 2-Methyl-4-Chlorophenoxyacetic acid herbicide degraders in agricultural soil and drilosphere.
In: Environmental Microbiology. Bd. 13 (2011) Heft 4 . - S. 991-1009.
DOI: https://doi.org/10.1111/j.1462-2920.2010.02405.x

Khadem, Ahmad F. ; Pohl, Arjan ; Wieczorek, Adam S. ; Mohammadi, Seyed S. ; Francoijs, Kees-Jan ; Stunnenberg, Henk G. ; Jetten, Mike S. M. ; op den Camp, Huub J. M.:
Autotrophic methanotrophy in Verrucomicrobia: Methylacidiphilum fumariolicum SolV uses the Calvin-Benson-Bassham cycle for carbon dioxide fixation.
In: Journal of Bacteriology. Bd. 193 (2011) Heft 17 . - S. 4438-4446.
DOI: https://doi.org/10.1128/JB.00407-11

Wüst, Pia K. ; Horn, Marcus A. ; Drake, Harold L.:
Clostridiaceae and Enterobacteriaceae as active fermenters in earthworm gut content.
In: The ISME Journal. Bd. 5 (2011) Heft 1 . - S. 92-106.
DOI: https://doi.org/10.1038/ismej.2010.99

Hunger, Sindy ; Schmidt, Oliver ; Hilgarth, Maik ; Horn, Marcus A. ; Kolb, Steffen ; Conrad, Ralf ; Drake, Harold L.:
Competing formate- and carbon dioxide-utilizing prokaryotes in an anoxic methane-emitting fen soil.
In: Applied and Environmental Microbiology. Bd. 77 (2011) Heft 11 . - S. 3773-3785.
DOI: https://doi.org/10.1128/AEM.00282-11

Fösel, Bärbel U. ; Drake, Harold L. ; Schramm, Andreas:
Defluviimonas denitrificans gen. nov., sp. nov., and Pararhodobacter aggregans gen. nov., sp. nov., non-phototrophic Rhodobacteraceae from the biofilter of a marine aquaculture.
In: Systematic and Applied Microbiology. Bd. 34 (2011) Heft 7 . - S. 498-502.
DOI: https://doi.org/10.1016/j.syapm.2011.08.006

Stock, Tilmann ; Selzer, Mirjam ; Connery, Sarah ; Seyhan, Deniz ; Resch, Armin ; Rother, Michael:
Disruption and complementation of the selenocysteine biosynthesis pathway reveals a hierarchy of selenoprotein gene expression in the archaeon Methanococcus maripaludis.
In: Molecular Microbiology. Bd. 82 (2011) Heft 3 . - S. 734-747.
DOI: https://doi.org/10.1111/j.1365-2958.2011.07850.x

Liu, Ya-Jun ; Zaprasis, Adrienne ; Liu, Shuang-Jiang ; Drake, Harold L. ; Horn, Marcus A.:
The earthworm Aporrectodea caliginosa stimulates abundance and activity of phenoxyalkanoic acid herbicide degraders.
In: The ISME Journal. Bd. 5 (2011) Heft 3 . - S. 473-485.
DOI: https://doi.org/10.1038/ismej.2010.140

Pilloni, Giovanni ; von Netzer, Frederick ; Engel, Marion ; Lüders, Tillmann:
Electron acceptor-dependent identification of key anaerobic toluene degraders at a tar-oil-contaminated aquifer by Pyro-SIP.
In: FEMS Microbiology Ecology. Bd. 78 (2011) Heft 1 . - S. 165-175.
DOI: https://doi.org/10.1111/j.1574-6941.2011.01083.x

Schellenberger, Stefanie ; Drake, Harold L. ; Kolb, Steffen:
Functionally redundant cellobiose-degrading soil bacteria respond differentially to oxygen.
In: Applied and Environmental Microbiology. Bd. 77 (2011) Heft 17 . - S. 6043-6048.
DOI: https://doi.org/10.1128/AEM.00564-11

Kolb, Steffen:
Methanotrophe: Treibhausgasvernichtende Mikroben.
In: BIOspektrum. Bd. 17 (2011) Heft 2 . - S. 146-149.
DOI: https://doi.org/10.1007/s12268-011-0018-2

Wüst, Pia K.:
Mikrobielle Kohlenstoff- und Stickstofftransformationen im Verdauungstrakt von Regenwürmern (Oligochaeta).
Bayreuth , 2011 . - XIV, 182 S.
( Dissertation, 2011 , Universität Bayreuth, Fakultät für Biologie, Chemie und Geowissenschaften)

Schmidt, Oliver ; Kaul, Pia ; Hellmuth, Susanne ; Borst, Katharina ; Horn, Marcus A. ; Drake, Harold L.:
Novel [NiFe]- and [FeFe]-hydrogenase gene transcripts indicative of active facultative aerobes and obligate anaerobes in earthworm gut contents.
In: Applied and Environmental Microbiology. Bd. 77 (2011) Heft 17 . - S. 5842-5850.
DOI: https://doi.org/10.1128/AEM.05432-11

Brielmann, Heike ; Lüders, Tillmann ; Schreglmann, Kathrin ; Ferraro, Francesco ; Avramov, Maria ; Hammerl, Verena ; Blum, Philipp ; Bayer, Peter ; Griebler, Christian:
Oberflächennahe Geothermie und ihre potenziellen Auswirkungen auf Grundwasserökosysteme.
In: Grundwasser. Bd. 16 (2011) Heft 2 . - S. 77-91.
DOI: https://doi.org/10.1007/s00767-011-0166-9

Wieczorek, Adam S. ; Drake, Harold L. ; Kolb, Steffen:
Organic acids and ethanol inhibit the oxidation of methane by mire methanotrophs.
In: FEMS Microbiology Ecology. Bd. 77 (2011) Heft 1 . - S. 28-39.
DOI: https://doi.org/10.1111/j.1574-6941.2011.01080.x

Hunger, Sindy ; Gößner, Anita S. ; Drake, Harold L.:
Trophic links between the acetogen Clostridium glycolicum KHa and the fermentative anaerobe Bacteroides xylanolyticus KHb, isolated from Hawaiian forest soil.
In: Applied and Environmental Microbiology. Bd. 77 (2011) Heft 17 . - S. 6281-6285.
DOI: https://doi.org/10.1128/AEM.05519-11

Kolb, Steffen:
Warum verschwindet das Treibhausgas Methan im Waldboden?
In: Spektrum. Bd. 7 (2011) Heft 1 . - S. 66-69.

2010

Zaprasis, Adrienne ; Liu, Ya-Jun ; Liu, Shuang-Jiang ; Drake, Harold L. ; Horn, Marcus A.:
Abundance of novel and diverse tfdA-like genes, encoding putative phenoxyalkanoic acid herbicide-degrading dioxygenases, in soil.
In: Applied and Environmental Microbiology. Bd. 76 (2010) Heft 1 . - S. 119-128.
DOI: https://doi.org/10.1128/AEM.01727-09

Palmer, Katharina ; Drake, Harold L. ; Horn, Marcus A.:
Association of novel and highly diverse acid-tolerant denitrifiers with N2O fluxes of an acidic fen.
In: Applied and Environmental Microbiology. Bd. 76 (2010) Heft 4 . - S. 1125-1134.
DOI: https://doi.org/10.1128/AEM.02256-09

Selesi, Draženka ; Jehmlich, Nico ; von Bergen, Martin ; Schmidt, Frank ; Rattei, Thomas ; Tischler, Patrick ; Lüders, Tillmann ; Meckenstock, Rainer U.:
Combined Genomic and Proteomic Approaches Identify Gene Clusters Involved in Anaerobic 2-Methylnaphthalene Degradation in the Sulfate-Reducing Enrichment Culture N47.
In: Journal of Bacteriology. Bd. 192 (2010) Heft 1 . - S. 295-306.
DOI: https://doi.org/10.1128/JB.00874-09

Kunapuli, Umakanth ; Jahn, Michael K. ; Lüders, Tillmann ; Geyer, Roland ; Heipieper, Hermann J. ; Meckenstock, Rainer U.:
Desulfitobacterium aromaticivorans sp. nov. and Geobacter toluenoxydans sp. nov., iron-reducing bacteria capable of anaerobic degradation of monoaromatic hydrocarbons.
In: International Journal of Systematic and Evolutionary Microbiology. Bd. 60 (2010) Heft 3 . - S. 686-695.
DOI: https://doi.org/10.1099/ijs.0.003525-0

Degelmann, Daniela M. ; Borken, Werner ; Drake, Harold L. ; Kolb, Steffen:
Different atmospheric methane-oxidizing communities in European beech and Norway spruce soils.
In: Applied and Environmental Microbiology. Bd. 76 (2010) Heft 10 . - S. 3228-3235.
DOI: https://doi.org/10.1128/AEM.02730-09

Winderl, Christian ; Penning, Holger ; von Netzer, Frederick ; Meckenstock, Rainer U. ; Lüders, Tillmann:
DNA-SIP identifies sulfate-reducing Clostridia as important toluene degraders in tar-oil-contaminated aquifer sediment.
In: The ISME Journal. Bd. 4 (2010) . - S. 1314-1325.
DOI: https://doi.org/10.1038/ismej.2010.54

Depkat-Jakob, Peter ; Hilgarth, Maik ; Horn, Marcus A. ; Drake, Harold L.:
Effect of earthworm feeding guild on ingested dissimilatory nitrate reducers and denitrifiers in the alimentary canal of the earthworm.
In: Applied and Environmental Microbiology. Bd. 76 (2010) Heft 18 . - S. 6205-6214.
DOI: https://doi.org/10.1128/AEM.01373-10

Bombach, Petra ; Chatzinotas, Antonis ; Neu, Thomas R. ; Kästner, Matthias ; Lüders, Tillmann ; Vogt, Carsten:
Enrichment and characterization of a sulfate-reducing toluene-degrading microbial consortium by combining in situ microcosms and stable isotope probing techniques.
In: FEMS Microbiology Ecology. Bd. 71 (2010) Heft 2 . - S. 237-246.
DOI: https://doi.org/10.1111/j.1574-6941.2009.00809.x

Herrmann, Steffi ; Kleinsteuber, Sabine ; Chatzinotas, Antonis ; Kuppardt, Steffen ; Lüders, Tillmann ; Richnow, Hans-Hermann ; Vogt, Carsten:
Functional characterization of an anaerobic benzene-degrading enrichment culture by DNA stable isotope probing.
In: Environmental Microbiology. Bd. 12 (2010) Heft 2 . - S. 401-411.
DOI: https://doi.org/10.1111/j.1462-2920.2009.02077.x

Anneser, Bettina ; Pilloni, Giovanni ; Bayer, Anne ; Lüders, Tillmann ; Griebler, Christian ; Einsiedl, Florian ; Richters, Lars:
High resolution analysis of contaminated aquifer sediments and groundwater : what can be learned in terms of natural attenuation?
In: Geomicrobiology Journal. Bd. 27 (2010) Heft 2 . - S. 130-142.
DOI: https://doi.org/10.1080/01490450903456723

Schmidt, Oliver ; Drake, Harold L. ; Horn, Marcus A.:
Hitherto unknown [Fe-Fe]-hydrogenase gene diversity in anaerobes and anoxic enrichments from a moderately acidic fen.
In: Applied and Environmental Microbiology. Bd. 76 (2010) Heft 6 . - S. 2027-2031.
DOI: https://doi.org/10.1128/AEM.02895-09

Stock, Tilmann ; Selzer, Mirjam ; Rother, Michael:
In vivo requirement of selenophosphate for selenoprotein synthesis in archaea.
In: Molecular Microbiology. Bd. 75 (2010) Heft 1 . - S. 149-160.
DOI: https://doi.org/10.1111/j.1365-2958.2009.06970.x

Kotzerke, Anja ; Klemer, Sven ; Kleineidam, Kristina ; Horn, Marcus A. ; Drake, Harold L. ; Schloter, Michael ; Wilke, Berndt-Michael:
Manure contaminated with the antibiotic sulfadiazine impairs the abundance of nirK- and nirS-type denitrifiers in the gut of the earthworm Eisenia fetida.
In: Biology and Fertility of Soils. Bd. 46 (2010) Heft 4 . - S. 415-418.
DOI: https://doi.org/10.1007/s00374-009-0434-3

Schellenberger, Stefanie ; Kolb, Steffen ; Drake, Harold L.:
Metabolic responses of novel cellulolytic and saccharolytic agricultural soil Bacteria to oxygen.
In: Environmental Microbiology. Bd. 12 (2010) Heft 4 . - S. 845-861.
DOI: https://doi.org/10.1111/j.1462-2920.2009.02128.x

Dörr, Nicole ; Glaser, Bruno ; Kolb, Steffen:
Methanotrophic communities in Brazilian ferralsols from naturally forested, afforested, and agricultural sites.
In: Applied and Environmental Microbiology. Bd. 76 (2010) Heft 4 . - S. 1307-1310.
DOI: https://doi.org/10.1128/AEM.02282-09

Meckenstock, Rainer U. ; Lüders, Tillmann ; Griebler, Christian ; Selesi, Draženka:
Microbial hydrocarbon degradation at coal gasification plants.
In: Timmis, Kenneth N. (Hrsg.): Handbook of Hydrocarbon and Lipid Microbiology. - Berlin : Springer, 2010 . - S. 2293-2312
DOI: https://doi.org/10.1007/978-3-540-77587-4_167

Lüders, Tillmann:
Stable isotope probing of hydrocarbon-degraders.
In: Timmis, Kenneth N. (Hrsg.): Handbook of Hydrocarbon and Lipid Microbiology. - Berlin : Springer, 2010 . - S. 4011-4026
DOI: https://doi.org/10.1007/978-3-540-77587-4_312

2009

Kolb, Steffen:
Aerobic methanol-oxidizing Bacteria in soil.
In: FEMS Microbiology Letters. Bd. 300 (2009) Heft 1 . - S. 1-10.
DOI: https://doi.org/10.1111/j.1574-6968.2009.01681.x

Glaubitz, Sabine ; Lüders, Tillmann ; Abraham, Wolf-Rainer ; Jost, Günter ; Jürgens, Klaus ; Labrenz, Matthias:
¹³C‐isotope analyses reveal that chemolithoautotrophic Gamma‐ and Epsilonproteobacteria feed a microbial food web in a pelagic redoxcline of the central Baltic Sea.
In: Environmental Microbiology. Bd. 11 (2009) Heft 2 . - S. 326-337.
DOI: https://doi.org/10.1111/j.1462-2920.2008.01770.x

Rasche, Frank ; Lüders, Tillmann ; Schloter, Michael ; Schäfer, Sabine ; Buegger, Franz ; Gattinger, Andreas ; Hood-Nowotny, Rebecca C. ; Sessitsch, Angela:
DNA-based stable isotope probing enables the identification of active bacterial endophytes in potatoes.
In: New Phytologist. Bd. 181 (2009) Heft 4 . - S. 802-807.
DOI: https://doi.org/10.1111/j.1469-8137.2008.02744.x

Brielmann, Heike ; Griebler, Christian ; Schmidt, Susanne I. ; Michel, Rainer ; Lüders, Tillmann:
Effects of thermal energy discharge on shallow groundwater ecosystems.
In: FEMS Microbiology Ecology. Bd. 68 (2009) Heft 3 . - S. 273-286.
DOI: https://doi.org/10.1111/j.1574-6941.2009.00674.x

Degelmann, Daniela M. ; Kolb, Steffen ; Dumont, Marc G. ; Murrell, J. Collin ; Drake, Harold L.:
Enterobacteriaceae facilitate the anaerobic degradation of glucose by a forest soil.
In: FEMS Microbiology Ecology. Bd. 68 (2009) Heft 3 . - S. 312-319.
DOI: https://doi.org/10.1111/j.1574-6941.2009.00681.x

Palmer, Katharina ; Drake, Harold L. ; Horn, Marcus A.:
Genome-derived criteria for assigning environmental narG and nosZ sequences to operational taxonomic units of nitrate reducers.
In: Applied and Environmental Microbiology. Bd. 75 (2009) Heft 15 . - S. 5170-5174.
DOI: https://doi.org/10.1128/AEM.00254-09

Wüst, Pia K. ; Horn, Marcus A. ; Henderson, Gemma ; Janssen, Peter H. ; Rehm, Bernd H. A. ; Drake, Harold L.:
Gut-associated denitrification and in vivo emission of nitrous oxide by the earthworm families Megascolecidae and Lumbricidae in New Zealand.
In: Applied and Environmental Microbiology. Bd. 75 (2009) Heft 11 . - S. 3430-3436.
DOI: https://doi.org/10.1128/AEM.00304-09

Wüst, Pia K. ; Horn, Marcus A. ; Drake, Harold L.:
In situ hydrogen and nitrous oxide as indicators of concomitant fermentation and denitrification in the alimentary canal of the earthworm Lumbricus terrestris.
In: Applied and Environmental Microbiology. Bd. 75 (2009) Heft 7 . - S. 1852-1859.
DOI: https://doi.org/10.1128/AEM.02745-08

Drake, Harold L. ; Horn, Marcus A. ; Wüst, Pia K.:
Intermediary ecosystem metabolism as a main driver of methanogenesis in acidic wetland soil.
In: Environmental Microbiology Reports. Bd. 1 (2009) Heft 5 . - S. 307-318.
DOI: https://doi.org/10.1111/j.1758-2229.2009.00050.x

Drake, Harold L.:
Lactovum.
In: de Vos, Paul ; Garrity, George M. ; Jones, Dorothy ; Frieg, Noel R. ; Ludwig, Wolfgang ; Rainey, Fred. A. ; Schleifer, Karl-Heinz ; Whitman, William B. (Hrsg.): Bergey's Manual of Systematic Bacteriology. Band 3. The Firmicutes. 2. Auflage. - New York : Springer, 2009 . - S. 722-723

Degelmann, Daniela M. ; Kolb, Steffen ; Borken, Werner:
Methane oxidation kinetics differ in European Beech and Norway Spruce soils.
In: European Journal of Soil Science. Bd. 60 (2009) Heft 4 . - S. 499-506.
DOI: https://doi.org/10.1111/j.1365-2389.2009.01138.x

Griebler, Christian ; Lüders, Tillmann:
Microbial biodiversity in groundwater ecosystems.
In: Freshwater Biology. Bd. 54 (2009) Heft 4 . - S. 649-677.
DOI: https://doi.org/10.1111/j.1365-2427.2008.02013.x

Kolb, Steffen:
The quest for atmospheric methane oxidizers in forest soils.
In: Environmental Microbiology Reports. Bd. 1 (2009) Heft 5 . - S. 336-346.
DOI: https://doi.org/10.1111/j.1758-2229.2009.00047.x

Horn, Marcus A. ; Wüst, Pia K. ; Drake, Harold L.:
Der Regenwurmdarm – ein mobiles Schlaraffenland für Bodenanaerobier.
In: BIOspektrum. Bd. 15 (2009) Heft 4 . - S. 377-379.

Drake, Harold L. ; Gößner, Anita S.:
Sporomusa.
In: de Vos, Paul ; Garrity, George M: ; Jones, Dorothy ; Frieg, Noel R. ; Ludwig, Wolfgang ; Rainey, Fred. A. ; Schleifer, Karl-Heinz ; Whitman, William B. (Hrsg.): Bergey's Manual of Systematic Bacteriology. Band 3. The Firmicutes. 2. Auflage. - New York : Springer, 2009 . - S. 1112-1116

Griebler, Christian ; Brielmann, Heike ; Lüders, Tillmann ; Schmidt, Susanne I.:
Sustainable Energy Production from Geothermal Sources and Possible Effects to Groundwater Ecosystems.
In: SILnews. Bd. 55 (2009) . - S. 17-18.

Drake, Harold L.:
Thermicanus.
In: de Vos, Paul ; Garrity, George M: ; Jones, Dorothy ; Frieg, Noel R. ; Ludwig, Wolfgang ; Rainey, Fred. A. ; Schleifer, Karl-Heinz ; Whitman, William B. (Hrsg.): Bergey's Manual of Systematic Bacteriology. Band 3. The Firmicutes. 2. Auflage. - New York : Springer, 2009 . - S. 454-455

Wüst, Pia K. ; Horn, Marcus A. ; Drake, Harold L.:
Trophic links between fermenters and methanogens in a moderately acidic fen soil.
In: Environmental Microbiology. Bd. 11 (2009) Heft 6 . - S. 1395-1409.
DOI: https://doi.org/10.1111/j.1462-2920.2009.01867.x

2008

Drake, Harold L. ; Gößner, Anita S.:
Acetogens: anaerobic gamblers at the oxic-anoxic interface.
In: Liu, Shuang-Jiang ; Drake, Harold L. (Hrsg.): Microbes and the environment: perspectives and challenges. - Beijing : Science Press, 2008 . - S. 59-66

Hamberger, Alexandra ; Horn, Marcus A. ; Dumont, Marc G. ; Murrell, J. Collin ; Drake, Harold L.:
Anaerobic Consumers of Monosaccharides in a Moderately Acidic Fen.
In: Applied and Environmental Microbiology. Bd. 74 (2008) Heft 10 . - S. 3112-3120.
DOI: https://doi.org/10.1128/AEM.00193-08

Gößner, Anita S. ; Picardal, Flynn ; Tanner, Ralph S. ; Drake, Harold L.:
Carbon metabolism of the moderately acid-tolerant acetogen Clostridium drakei isolated from peat.
In: FEMS Microbiology Letters. Bd. 287 (2008) Heft 2 . - S. 236-242.
DOI: https://doi.org/10.1111/j.1574-6968.2008.01313.x

Whitehead, Terence R. ; Price, Neil P. ; Drake, Harold L. ; Cotta, Michael A.:
Catabolic Pathway for the Production of Skatole and Indoleacetic Acid by the Acetogen Clostridium drakei, Clostridium scatologenes, and Swine Manure.
In: Applied and Environmental Microbiology. Bd. 74 (2008) Heft 6 . - S. 1950-1953.
DOI: https://doi.org/10.1128/AEM.02458-07

Liu, Ya-Jun ; Li, Pan-Pan ; Zhao, Ke-Xin ; Wang, Bao-Jun ; Jiang, Cheng-Ying ; Drake, Harold L. ; Liu, Shuang-Jiang:
Corynebacterium glutamicum contains 3-deoxy-D-arabino-heptulosonate 7-phosphate synthases that display novel biochemical features.
In: Applied and Environmental Microbiology. Bd. 74 (2008) Heft 17 . - S. 5497-5503.
DOI: https://doi.org/10.1128/AEM.00262-08

Drake, Harold L. ; Liu, Shuang-Jiang:
Current and future perspectives on the environmental importance of microorganisms.
In: Liu, Shuang-Jiang ; Drake, Harold L. (Hrsg.): Microbes and the environment: perspectives and challenges. - Beijing : Science Press, 2008 . - S. 3-11

Winderl, Christian ; Anneser, Bettina ; Griebler, Christian ; Meckenstock, Rainer U. ; Lüders, Tillmann:
Depth-resolved quantification of anaerobic toluene degraders and aquifer microbial community patterns in distinct redox zones of a tar oil contaminant plume.
In: Applied and Environmental Microbiology. Bd. 74 (2008) Heft 3 . - S. 792-801.
DOI: https://doi.org/10.1128/AEM.01951-07

Maurer, Daniel ; Kolb, Steffen ; Haumaier, Ludwig ; Borken, Werner:
Inhibition of atmospheric methane oxidation by monoterpenes in Norway spruce and European beech soils.
In: Soil Biology & Biochemistry. Bd. 40 (2008) Heft 12 . - S. 3014-3020.
DOI: https://doi.org/10.1016/j.soilbio.2008.08.023

Microbes and the Environment : perspectives and Challenges.
Hrsg.: Liu, Shuang-Jiang ; Drake, Harold L.
Beijing : Science Press , 2008 . - VIII, 160 S.

Küsel, Kirsten ; Blöthe, Marco ; Schulz, Daria ; Reiche, Marco ; Drake, Harold L.:
Microbial reduction of iron and porewater biogeochemistry in acidic peatlands.
In: Biogeosciences. Bd. 5 (2008) Heft 6 . - S. 1537-1549.
DOI: https://doi.org/10.5194/bg-5-1537-2008

Fösel, Bärbel U. ; Gieseke, Armin ; Schwermer, Carsten ; Stief, Peter ; Koch, Liat ; Cytryn, Eddie ; de la Torré, José ; van Rijn, Jaap ; Minz, Dror ; Drake, Harold L. ; Schramm, Andreas:
Nitrosomonas Nm143-like ammonia oxidizers and Nitrospira marina-like nitrite oxidizers dominate the nitrifier community in a marine aquaculture biofilm.
In: FEMS Microbiology Ecology. Bd. 63 (2008) Heft 2 . - S. 192-204.
DOI: https://doi.org/10.1111/j.1574-6941.2007.00418.x

Drake, Harold L. ; Gößner, Anita S. ; Daniel, Steven L.:
Old acetogens, new light.
In: Annals of the New York Academy of Sciences. Bd. 1125 (2008) Heft 1 . - S. 100-128.
DOI: https://doi.org/10.1196/annals.1419.016

Euringer, Kathrin ; Lüders, Tillmann:
An optimised PCR/T-RFLP fingerprinting approach for the investigation of protistan communities in groundwater environments.
In: Journal of Microbiological Methods. Bd. 75 (2008) Heft 2 . - S. 262-268.
DOI: https://doi.org/10.1016/j.mimet.2008.06.012

Blöthe, Marco ; Akob, Denise M. ; Kostka, Joel E. ; Göschel, Kathrin ; Drake, Harold L. ; Küsel, Kirsten:
pH gradient-induced heterogeneity of Fe(III)-reducing microorganisms in coal mining-associated lake sediments.
In: Applied and Environmental Microbiology. Bd. 74 (2008) Heft 4 . - S. 1019-1029.
DOI: https://doi.org/10.1128/AEM.01194-07

Schmalenberger, Achim ; Tebbe, Christoph C. ; Kertesz, Michael A. ; Drake, Harold L. ; Küsel, Kirsten:
Two-dimensional single strand conformation polymorphism (SSCP) of 16S rRNA gene fragments reveals highly dissimilar bacterial communities in an acidic fen.
In: European Journal of Soil Biology. Bd. 44 (2008) Heft 5-6 . - S. 495-500.
DOI: https://doi.org/10.1016/j.ejsobi.2008.07.002

2007

Daniel, Steven L. ; Pilsl, Christine ; Drake, Harold L.:
Anaerobic oxalate consumption by microorganisms in forest soils.
In: Research in Microbiology. Bd. 158 (2007) Heft 3 . - S. 303-309.
DOI: https://doi.org/10.1016/j.resmic.2006.12.010

Drake, Harold L. ; Horn, Marcus A.:
As the worm turns : the earthworm gut as a transient habitat for soil microbial biomes.
In: Annual Review of Microbiology. Bd. 61 (2007) Heft 1 . - S. 169-189.
DOI: https://doi.org/10.1146/annurev.micro.61.080706.093139

Winderl, Christian ; Schäfer, Sabine ; Lüders, Tillmann:
Detection of anaerobic toluene and hydrocarbon degraders in contaminated aquifers using benzylsuccinate synthase (bssA) genes as a functional marker.
In: Environmental Microbiology. Bd. 9 (2007) Heft 4 . - S. 1035-1046.
DOI: https://doi.org/10.1111/j.1462-2920.2006.01230.x

Neufeld, Josh D. ; Vohra, Jyotsna ; Dumont, Marc G. ; Lüders, Tillmann ; Manefield, Mike ; Friedrich, Michael W. ; Murrell, J. Collin:
DNA stable-isotope probing.
In: Nature Protocols. Bd. 2 (2007) Heft 4 . - S. 860-866.
DOI: https://doi.org/10.1038/nprot.2007.109

Edwards, Lainie ; Küsel, Kirsten ; Drake, Harold L. ; Kostka, Joel E.:
Electron flow in acidic subsurface sediments co-contaminated with nitrate and uranium.
In: Geochimica et Cosmochimica Acta. Bd. 71 (2007) Heft 3 . - S. 643-654.
DOI: https://doi.org/10.1016/j.gca.2006.09.017

Fösel, Bärbel U. ; Gößner, Anita S. ; Drake, Harold L. ; Schramm, Andreas:
Geminicoccus roseus gen. nov., sp. nov., an aerobic phototrophic Alphaproteobacterium isolated from a marine aquaculture biofilter.
In: Systematic and Applied Microbiology. Bd. 30 (2007) Heft 8 . - S. 581-586.
DOI: https://doi.org/10.1016/j.syapm.2007.05.005

Kemnitz, Dana ; Kolb, Steffen ; Conrad, Ralf:
High abundance of Crenarchaeota in a temperate acidic forest soil.
In: FEMS Microbiology Ecology. Bd. 60 (2007) Heft 3 . - S. 442-448.
DOI: https://doi.org/10.1111/j.1574-6941.2007.00310.x

Schmalenberger, Achim ; Drake, Harold L. ; Küsel, Kirsten:
High unique diversity of sulfate-reducing prokaryotes characterized in a depth gradient in an acidic fen.
In: Environmental Microbiology. Bd. 9 (2007) Heft 5 . - S. 1317-1328.
DOI: https://doi.org/10.1111/j.1462-2920.2007.01251.x

Schwarz, Julia I. K. ; Lüders, Tillmann ; Eckert, Werner ; Conrad, Ralf:
Identification of acetate-utilizing Bacteria and Archaea in methanogenic profundal sediments of Lake Kinneret (Israel) by stable isotope probing of rRNA.
In: Environmental Microbiology. Bd. 9 (2007) Heft 1 . - S. 223-237.
DOI: https://doi.org/10.1111/j.1462-2920.2006.01133.x

Bothe, Hermann ; Drake, Harold L.:
Interactions among organisms that result in enhanced activities N-cycle reactions.
In: Bothe, Hermann ; Ferguson, Stuart J. ; Newton, William E. (Hrsg.): Biology of the Nitrogen Cycle. - Amsterdam : Elsevier, 2007 . - S. 397-405

Whiteley, Andrew S. ; Thomson, Bruce ; Lüders, Tillmann ; Manefield, Mike:
RNA stable-isotope probing.
In: Nature Protocols. Bd. 2 (2007) Heft 4 . - S. 838-844.
DOI: https://doi.org/10.1038/nprot.2007.115

Liu, Xing-Yu ; Wang, Bao-Jun ; Jiang, Cheng-Ying ; Zhao, Ke-Xin ; Drake, Harold L. ; Liu, Shuang-Jiang:
Simultaneous biodegradation of nitrogen-containing aromatic compounds in a sequencing batch bioreactor.
In: Journal of Environmental Sciences. Bd. 19 (2007) Heft 5 . - S. 530-535.
DOI: https://doi.org/10.1016/S1001-0742(07)60088-6

Kunapuli, Umakanth ; Lüders, Tillmann ; Meckenstock, Rainer U.:
The use of stable isotope probing to identify key iron-reducing microorganisms involved in anaerobic benzene degradation.
In: The ISME Journal. Bd. 1 (2007) . - S. 643-653.
DOI: https://doi.org/10.1038/ismej.2007.73

2006

Drake, Harold L. ; Küsel, Kirsten ; Matthies, Carola:
Acetogenic prokaryote.
In: Dworkin, Martin (Hrsg.): The Prokaryotes. Band 2. Ecophysiology and Biochemistry. 3. Auflage. - New York : Springer, 2006 . - S. 354-420

Knief, Claudia ; Kolb, Steffen ; Bodelier, Paul L. E. ; Lipski, André ; Dunfield, Peter F.:
The active methanotrophic community in hydromorphic soils changes in response to changing methane concentration.
In: Environmental Microbiology. Bd. 8 (2006) Heft 2 . - S. 321-333.
DOI: https://doi.org/10.1111/j.1462-2920.2005.00898.x

Schnurr-Pütz, Silvia ; Bååth, Erland ; Guggenberger, Georg ; Drake, Harold L. ; Küsel, Kirsten:
Compaction of forest soil by logging machinery favours occurence of prokaryotes.
In: FEMS Microbiology Ecology. Bd. 58 (2006) Heft 3 . - S. 503-516.
DOI: https://doi.org/10.1111/j.1574-6941.2006.00175.x

Küsel, Kirsten ; Trinkwalter, Tanja ; Drake, Harold L. ; Devereux, Richard:
Comparative evaluation of anaerobic bacterial communities associated with roots of submerged macrophytes growing in marine or brackish water sediments.
In: Journal of Experimental Marine Biology and Ecology. Bd. 337 (2006) Heft 1 . - S. 49-58.
DOI: https://doi.org/10.1016/j.jembe.2006.06.004

Drake, Harold L. ; Schramm, Andreas ; Horn, Marcus A.:
Earthworm gut microbial biomes: their importance to soil microorganisms, denitrification, and the terrestrial production of the greenhouse gas N2O.
In: König, Helmut ; Varma, Ajit (Hrsg.): Intestinal Microorganisms of Termites and other Invertebrates. - Berlin : Springer, 2006 . - S. 65-87 . - (Soil Biology ; 6 )

Drake, Harold L. ; Horn, Marcus A.:
Earthworms as a transient heaven for terrestrial denitrifying microbes: a review.
In: Engineering in Life Sciences. Bd. 6 (2006) Heft 3 . - S. 261-265.
DOI: https://doi.org/10.1002/elsc.200620126

Bodelier, Paul L. E. ; Frenzel, Peter ; Drake, Harold L. ; Küsel, Kirsten ; Hurek, Thomas ; Reinhold-Hurek, Barbara ; Lovell, Charles R. ; Megonigal, Patrick ; Sorrell, Brian:
Ecological aspects of microbes and microbial communities inhabiting the rhizosphere of wetland plants.
In: Verhoeven, Jos T. A. ; Beltman, Boudewijn ; Bobbink, Roland ; Wigham, Dennis F. (Hrsg.): Wetlands and Natural Resource Management. - Berlin : Springer, 2006 . - S. 205-238 . - (Ecological Studies ; 190 )
DOI: https://doi.org/10.1007/978-3-540-33187-2_10

Lüders, Tillmann ; Kindler, Reimo ; Miltner, Anja ; Friedrich, Michael W. ; Kästner, Matthias:
Identification of bacterial micropredators distinctively active in a soil microbial food web.
In: Applied and Environmental Microbiology. Bd. 72 (2006) Heft 8 . - S. 5342-5348.
DOI: https://doi.org/10.1128/AEM.00400-06

Horn, Marcus A. ; Mertel, Ralf ; Kästner, Matthias ; Gehre, Matthias ; Drake, Harold L.:
In vivo emission of dinitrogen by earthworms via denitrifying bacteria in the gut.
In: Applied and Environmental Microbiology. Bd. 72 (2006) Heft 2 . - S. 1013-1018.
DOI: https://doi.org/10.1128/AEM.72.2.1013-1018.2006

Ogram, Andrew ; Bridgham, Scott ; Corstanje, Ron ; Drake, Harold L. ; Küsel, Kirsten ; Mills, Anthony ; Newman, S. ; Portier, K. ; Wetzel, R.:
Linkages between microbial community composition and biogeochemical processes across scales.
In: Verhoeven, Jos T. A. ; Beltman, Boudewijn ; Bobbink, Roland ; Wigham, Dennis F. (Hrsg.): Wetlands and Natural Resource Management. - Berlin : Springer, 2006 . - S. 239-268 . - (Ecological Studies ; 190 )
DOI: https://doi.org/10.1007/978-3-540-33187-2_11

Musat, Niculina ; Werner, Ursula ; Kolb, Steffen ; Dodenhof, Tanja ; Knittel, Katrin ; van Beusekom, Justus E. E. ; de Beer, Dirk ; Dubilier, Nicole ; Amann, Rudolf:
Microbial community structure of sandy intertidal sediments in the North Sea, Sylt-Rømø Basin, Wadden Sea.
In: Systematic and Applied Microbiology. Bd. 29 (2006) Heft 4 . - S. 333-348.
DOI: https://doi.org/10.1016/j.syapm.2005.12.006

Horn, Marcus A. ; Drake, Harold L. ; Schramm, Andreas:
Nitrous oxide reductase genes (nosZ) of denitrifying microbial populations in soil and the earthworm gut are phylogenetically similar.
In: Applied and Environmental Microbiology. Bd. 72 (2006) Heft 2 . - S. 1019-1026.
DOI: https://doi.org/10.1128/AEM.72.2.1019-1026.2006

Gößner, Anita S. ; Küsel, Kirsten ; Schulz, Daria ; Trenz, Sonja ; Lovell, Charles R. ; Acker, Georg ; Drake, Harold L.:
Trophic interaction of the aerotolerant anaerobe Clostridium intestinale and the acetogen Sporomusa rhizae sp. nov. isolated from roots of the black needlerush Juncus roemerianus.
In: Microbiology. Bd. 152 (2006) Heft 4 . - S. 1209-1219.
DOI: https://doi.org/10.1099/mic.0.28725-0

Whiteley, Andrew S. ; Manefield, Mike ; Lüders, Tillmann:
Unlocking the "microbial black box" using RNA-based stable isotope probing technologies.
In: Current Opinion in Biotechnology. Bd. 17 (2006) Heft 1 . - S. 67-71.
DOI: https://doi.org/10.1016/j.copbio.2005.11.002

2005

Kolb, Steffen ; Knief, Claudia ; Dunfield, Peter F. ; Conrad, Ralf:
Abundance and activity of uncultured methanotrophic bacteria involved in the consumption of atmospheric methane in two forest soils.
In: Environmental Microbiology. Bd. 7 (2005) Heft 8 . - S. 1150-1161.
DOI: https://doi.org/10.1111/j.1462-2920.2005.00791.x

Drake, Harold L. ; Küsel, Kirsten:
Acetogenic clostridia.
In: Dürre, Peter (Hrsg.): Handbook on clostridia. - Boca Raton, Fla : Taylor & Francis, 2005 . - S. 719-746

Ricke, Peter ; Kolb, Steffen ; Braker, Gesche:
Application of a newly developed ARB software-integrated tool for in silico terminal restriction fragment length polymorphism analysis reveals the dominance of a novel pmoA cluster in a forest soil.
In: Applied and Environmental Microbiology. Bd. 71 (2005) Heft 3 . - S. 1671-1673.
DOI: https://doi.org/10.1128/AEM.71.3.1671-1673.2005

Horn, Marcus A. ; Ihssen, Julian ; Matthies, Carola ; Schramm, Andreas ; Acker, Georg ; Drake, Harold L.:
Dechloromonas denitrificans sp. nov., Flavobacterium denitrificans sp. nov., Paenibacillus anaericanus sp. nov., and Paenibacillus terrae strain MH72, N₂O-producing bacteria isolated from the gut of the earthworm Aporrectodea caliginosa.
In: International Journal of Systematic and Evolutionary Microbiology. Bd. 55 (2005) Heft 3 . - S. 1255-1265.
DOI: https://doi.org/10.1099/ijs.0.63484-0

Lu, Yahai ; Lüders, Tillmann ; Friedrich, Michael W. ; Conrad, Ralf:
Detecting active methanogenic populations on rice roots using stable isotope probing.
In: Environmental Microbiology. Bd. 7 (2005) Heft 3 . - S. 326-336.
DOI: https://doi.org/10.1111/j.1462-2920.2005.00697.x

Kemnitz, Dana ; Kolb, Steffen ; Conrad, Ralf:
Phenotypic characterization of Rice Cluster III archaea without prior isolation by applying quantitative polymerase chain reaction to an enrichment culture.
In: Environmental Microbiology. Bd. 7 (2005) Heft 4 . - S. 553-565.
DOI: https://doi.org/10.1111/j.1462-2920.2004.00723.x

Kolb, Steffen ; Cabrera, Antonio ; Kammann, Claudia ; Kämpfer, Peter ; Conrad, Ralf ; Jäckel, Udo:
Quantitative impact of CO2 enriched atmosphere on abundances of methanotrophic bacteria in a meadow soil.
In: Biology and Fertility of Soils. Bd. 41 (2005) Heft 5 . - S. 337-342.
DOI: https://doi.org/10.1007/s00374-005-0842-y

Chan, On Chim ; Claus, Peter ; Casper, Peter ; Ulrich, Andreas ; Lüders, Tillmann ; Conrad, Ralf:
Vertical distribution of structure and function of the methanogenic archaeal community in Lake Dagow sediment.
In: Environmental Microbiology. Bd. 7 (2005) Heft 8 . - S. 1139-1149.
DOI: https://doi.org/10.1111/j.1462-2920.2005.00790.x

2004

Chin, K.-J. ; Lüders, Tillmann ; Friedrich, Michael W. ; Klose, M. ; Conrad, Ralf:
Archaeal community structure and pathway of methane formation on rice roots.
In: Microbial Ecology. Bd. 47 (2004) Heft 1 . - S. 59-67.
DOI: https://doi.org/10.1007/s00248-003-2014-7

Lüders, Tillmann ; Manefield, Mike ; Friedrich, Michael W.:
Enhanced sensitivity of DNA- and rRNA-based stable isotope probing by fractionation and quantitative analysis of isopycnic centrifugation gradients.
In: Environmental Microbiology. Bd. 6 (2004) Heft 1 . - S. 73-78.
DOI: https://doi.org/10.1046/j.1462-2920.2003.00536.x

Nielsen, Jeppe L. ; Schramm, Andreas ; Bernhard, Anne E. ; van den Engh, Gerrit J. ; Stahl, David A.:
Flow cytometry-assisted cloning of specific sequence motifs from complex 16S rRNA gene libraries.
In: Applied and Environmental Microbiology. Bd. 70 (2004) Heft 12 . - S. 7550-7554.
DOI: https://doi.org/10.1128/AEM.70.12.7550-7554.2004

Matthies, Carola ; Gößner, Anita S. ; Acker, Georg ; Schramm, Andreas ; Drake, Harold L.:
Lactovum miscens gen. nov., sp. nov., an aerotolerant, psychrotolerant, mixed-fermentative anaerobe from acidic forest soil.
In: Research in Microbiology. Bd. 155 (2004) Heft 10 . - S. 847-854.
DOI: https://doi.org/10.1016/j.resmic.2004.06.006

Loy, Alexander ; Küsel, Kirsten ; Lehner, Angelika ; Drake, Harold L. ; Wagner, Michael:
Microarray and functional gene analyses of sulfate-reducing prokaryotes in low-sulfate, acidic fens reveal cooccurrence of recognized genera and novel lineages.
In: Applied and Environmental Microbiology. Bd. 70 (2004) Heft 12 . - S. 6998-7009.
DOI: https://doi.org/10.1128/AEM.70.12.6998-7009.2004

Horn, Marcus A.:
Mikrobiologie der N2O-Bildung im Darm von Regenwürmern (Oligochaeta, Lumbricidae).
Bayreuth , 2004 . - (Bayreuther Forum Ökologie ; 109 )
( Dissertation, 2004 , Universität Bayreuth, Fakultät für Biologie, Chemie und Geowissenschaften)

Müller, Volker ; Imkamp, Frank ; Rauwolf, Andreas ; Küsel, Kirsten ; Drake, Harold L.:
Molecular and cellular biology of acetogenic bacteria.
In: Nakano, Michiko M. ; Zuber, Peter (Hrsg.): Strict and facultative anaerobes : medical and environmental aspects. - Wymondham : Horizon Bioscience, 2004 . - S. 251-281

Daniel, Steven L. ; Pilsl, Christine ; Drake, Harold L.:
Oxalate metabolism by the acetogenic bacterium Moorella thermoacetica.
In: FEMS Microbiology Letters. Bd. 231 (2004) Heft 1 . - S. 39-43.
DOI: https://doi.org/10.1016/S0378-1097(03)00924-8

Drake, Harold L. ; Daniel, Steven L.:
Physiology of the thermophilic acetogen Moorella thermoacetica.
In: Research in Microbiology. Bd. 155 (2004) Heft 10 . - S. 869-883.
DOI: https://doi.org/10.1016/j.resmic.2004.10.002

Küsel, Kirsten ; Alewell, Christine:
Riparian zones in a forested catchment : hot spots for microbial reductive processes.
In: Matzner, Egbert (Hrsg.): Biogeochemistry of forested catchments in a changing environment : a German case Study. - Berlin : Springer, 2004 . - S. 377-398 . - (Ecological Studies ; 172 )

Lüders, Tillmann ; Wagner, Bianca ; Claus, Peter ; Friedrich, Michael W.:
Stable isotope probing of rRNA and DNA reveals a dynamic methylotroph community and trophic interactions with fungi and protozoa in oxic rice field soil.
In: Environmental Microbiology. Bd. 6 (2004) Heft 1 . - S. 60-72.
DOI: https://doi.org/10.1046/j.1462-2920.2003.00535.x

Lüders, Tillmann ; Pommerenke, Bianca ; Friedrich, Michael W.:
Stable-isotope probing of microorganisms thriving at thermodynamic limits : syntrophic propionate oxidation in flooded soil.
In: Applied and Environmental Microbiology. Bd. 70 (2004) Heft 10 . - S. 5778-5786.
DOI: https://doi.org/10.1128/AEM.70.10.5778-5786.2004

2003

Schramm, Andreas ; Davidson, Seana K. ; Dodsworth, Jeremy A. ; Drake, Harold L. ; Stahl, David A. ; Dubilier, Nicole:
Acidovorax-like symbionts in the nephridia of earthworms.
In: Environmental Microbiology. Bd. 5 (2003) Heft 9 . - S. 804-809.
DOI: https://doi.org/10.1046/j.1462-2920.2003.00474.x

Youhnovski, Nikolay ; Schulz, Daria ; Schwarz, Caroline ; Spiteller, Gerhard ; Schubert, Klaus:
Determination of Hydroxyoctadecadienoic Acids.
In: Zeitschrift für Naturforschung C. Bd. 58 (2003) Heft 3-4 . - S. 268-276.

Horn, Marcus A. ; Schramm, Andreas ; Drake, Harold L.:
The earthworm gut : an ideal habitat for ingested N2O-producing microorganisms.
In: Applied and Environmental Microbiology. Bd. 69 (2003) Heft 3 . - S. 1662-1669.
DOI: https://doi.org/10.1128/AEM.69.3.1662-1669.2003

Lüders, Tillmann ; Friedrich, Michael W.:
Evaluation of PCR amplification bias by terminal restriction fragment length polymorphism analysis of small-subunit rRNA and mcrA genes by using defined template mixtures of methanogenic pure cultures and soil DNA extracts.
In: Applied and Environmental Microbiology. Bd. 69 (2003) Heft 1 . - S. 320-326.
DOI: https://doi.org/10.1128/AEM.69.1.320-326.2003

Drake, Harold L. ; Küsel, Kirsten:
How the diverse physiologic potentials of acetogens determine their in situ realities.
In: Ljungdahl, Lars G.(Hrsg.): Biochemistry and physiology of anaerobic bacteria. - New York : Springer, 2003 . - S. 171-190

Horn, Marcus A. ; Matthies, Carola ; Küsel, Kirsten ; Schramm, Andreas ; Drake, Harold L.:
Hydrogenotrophic methanogenesis by moderately acid-tolerant methanogens of a methane-emitting acidic peat.
In: Applied and Environmental Microbiology. Bd. 69 (2003) Heft 1 . - S. 74-83.
DOI: https://doi.org/10.1128/AEM.69.1.74-83.2003

Schramm, Andreas:
In situ analysis of structure and activity of the nitrifying community in biofilms, aggregates, and sediments.
In: Geomicrobiology Journal. Bd. 20 (2003) Heft 4 . - S. 313-333.
DOI: https://doi.org/10.1080/01490450390241026

Altmann, Dörte ; Stief, Peter ; Amann, Rudolf ; de Beer, Dirk ; Schramm, Andreas:
In situ distribution and activity of nitrifying bacteria in freshwater sediment.
In: Environmental Microbiology. Bd. 5 (2003) Heft 9 . - S. 798-803.
DOI: https://doi.org/10.1046/j.1469-2920.2003.00469.x

Simankova, Maria V. ; Kotsyurbenko, Oleg R. ; Lüders, Tillmann ; Nozhevnikova, Alla N. ; Wagner, Bianca ; Conrad, Ralf ; Friedrich, Michael W.:
Isolation and characterization of new strains of methanogens from cold terrestrial habitats.
In: Systematic and Applied Microbiology. Bd. 26 (2003) Heft 2 . - S. 312-318.
DOI: https://doi.org/10.1078/072320203322346173

Küsel, Kirsten:
Microbial cycling of iron and sulfur in acidic coal mining lake sediments.
In: Water, Air, & Soil Pollution : Focus. Bd. 3 (2003) Heft 1 . - S. 67-90.
DOI: https://doi.org/10.1023/A:1022103419928

Küsel, Kirsten ; Chabbi, Abad ; Trinkwalter, Tanja:
Microbial processes associated with roots of bulbous rush coated with iron plaques.
In: Microbial Ecology. Bd. 46 (2003) Heft 3 . - S. 302-311.
DOI: https://doi.org/10.1007/s00248-002-1054-8

Ihssen, Julian ; Horn, Marcus A. ; Gößner, Anita S. ; Matthies, Carola ; Schramm, Andreas ; Drake, Harold L.:
N2O-producing microorganisms in the gut of the earthworm Aporrectodea caliginosa are indicative of ingested soil bacteria.
In: Applied and Environmental Microbiology. Bd. 69 (2003) Heft 3 . - S. 1655-1661.
DOI: https://doi.org/10.1128/AEM.69.3.1655-1661.2003

Seifritz, Corinna ; Drake, Harold L. ; Daniel, Steven L.:
Nitrite as an energy-conserving electron sink for the acetogenic bacterium Moorella thermoacetica.
In: Current Microbiology. Bd. 46 (2003) Heft 5 . - S. 329-333.
DOI: https://doi.org/10.1007/s00284-002-3830-6

Kolb, Steffen ; Knief, Claudia ; Stubner, Stephan ; Conrad, Ralf:
Quantitative detection of methanotrophs in soil by novel pmoA-targeted real-time PCR assays.
In: Applied and Environmental Microbiology. Bd. 69 (2003) Heft 5 . - S. 2423-2429.
DOI: https://doi.org/10.1128/AEM.69.5.2423-2429.2003

Stief, Peter ; Schramm, Andreas ; Altmann, Dörte ; de Beer, Dirk:
Temporal variation of nitrification rates in experimental freshwater sediments enriched with ammonia or nitrite.
In: FEMS Microbiology Ecology. Bd. 46 (2003) Heft 1 . - S. 63-71.
DOI: https://doi.org/10.1016/S0168-6496(03)00193-4

2002

Reith, Frank ; Drake, Harold L. ; Küsel, Kirsten:
Anaerobic activities of bacteria and fungi in moderately acidic conifer and deciduous leaf litter.
In: FEMS Microbiology Ecology. Bd. 41 (2002) Heft 1 . - S. 27-35.
DOI: https://doi.org/10.1111/j.1574-6941.2002.tb00963.x

Llobet-Brossa, Enrique ; Rabus, Ralf ; Böttcher, Michael E. ; Könecke, Martin ; Finke, Niko ; Schramm, Andreas ; Meyer, Rikke L. ; Grötzschel, Stefan ; Rosselló-Mora, Ramon ; Amann, Rudolf:
Community structure and activity of sulfate-reducing bacteria in an intertidal surface sediment : a multi-method approach.
In: Aquatic Microbial Ecology. Bd. 29 (2002) Heft 3 . - S. 211-226.
DOI: https://doi.org/10.3354/ame029211

Drake, Harold L. ; Küsel, Kirsten ; Matthies, Carola:
Ecological consequences of the phylogenetic and physiological diversities of acetogens.
In: Antonie van Leeuwenhoek. Bd. 81 (2002) Heft 1-4 . - S. 203-213.
DOI: https://doi.org/10.1023/A:1020514617738

Lüders, Tillmann ; Friedrich, Michael W.:
Effects of amendment with ferrihydrite and gypsum on the structure and activity of methanogenic populations in rice field soil.
In: Applied and Environmental Microbiology. Bd. 68 (2002) Heft 5 . - S. 2484-2494.
DOI: https://doi.org/10.1128/AEM.68.5.2484-2494.2002

Schramm, Andreas ; Fuchs, Bernhard M. ; Nielsen, Jeppe L. ; Tonolla, Mauro ; Stahl, David A.:
Fluorescence in situ hybridization of 16S rRNA gene clones (Clone-FISH) for probe validation and screening of clone libraries.
In: Environmental Microbiology. Bd. 4 (2002) Heft 11 . - S. 713-720.
DOI: https://doi.org/10.1046/j.1462-2920.2002.00364.x

Seifritz, Corinna ; Fröstl, Jürgen M. ; Drake, Harold L. ; Daniel, Steven L.:
Influence of nitrate on oxalate- and glyoxylate-dependent growth and acetogenesis by Moorella thermoacetica.
In: Archives of Microbiology. Bd. 178 (2002) Heft 6 . - S. 457-464.
DOI: https://doi.org/10.1007/s00203-002-0475-6

Vogelsang, Christian ; Schramm, Andreas ; Picioreanu, Cristian ; van Loosdrecht, Mark C. M. ; Østgaard, Kjetill:
Microbial community analysis by FISH for mathematical modelling of selective enrichment of gel-entrapped nitrifiers obtained from domestic wastewater.
In: Hydrobiologia. Bd. 469 (2002) Heft 1-3 . - S. 165-178.
DOI: https://doi.org/10.1023/A:1015598704990

Küsel, Kirsten ; Wagner, Christine ; Trinkwalter, Tanja ; Gößner, Anita S. ; Drake, Harold L.:
Microbial reduction of Fe(III) and turnover of acetate in Hawaiian soils.
In: FEMS Microbiology Ecology. Bd. 40 (2002) Heft 1 . - S. 73-81.
DOI: https://doi.org/10.1111/j.1574-6941.2002.tb00938.x

Küsel, Kirsten ; Roth, Ursula ; Drake, Harold L.:
Microbial reduction of Fe(III) in the presence of oxygen under low pH conditions.
In: Environmental Microbiology. Bd. 4 (2002) Heft 7 . - S. 414-421.
DOI: https://doi.org/10.1046/j.1462-2920.2002.00314.x

Regenspurg, Simona ; Gößner, Anita S. ; Peiffer, Stefan ; Küsel, Kirsten:
Potential Remobilization of Toxic Anions during Reduction of Arsenated and Chromated Schwertmannite by the Dissimilatory Fe(III)-Reducing Bacterium Acidiphilium cryptum JF-5.
In: Water, Air, & Soil Pollution : Focus. Bd. 2 (2002) Heft 3 . - S. 57-67.
DOI: https://doi.org/10.1023/A:1019903729223

Gieseke, Armin ; Arnz, P. ; Amann, Rudolf ; Schramm, Andreas:
Simultaneous P and N removal in a sequencing batch biofilm reactor: insights from reactor- and microscale investigations.
In: Water Research. Bd. 36 (2002) Heft 2 . - S. 501-509.
DOI: https://doi.org/10.1016/S0043-1354(01)00232-9

Karnholz, Arno ; Küsel, Kirsten ; Gößner, Anita S. ; Schramm, Andreas ; Drake, Harold L.:
Tolerance and metabolic response of acetogenic bacteria toward oxygen.
In: Applied and Environmental Microbiology. Bd. 68 (2002) Heft 2 . - S. 1005-1009.
DOI: https://doi.org/10.1128/AEM.68.2.1005-1009.2002

2001

Ramakrishnan, Balasubramanian ; Lüders, Tillmann ; Dunfield, Peter F. ; Conrad, Ralf ; Friedrich, Michael W.:
Archaeal community structures in rice soils from different geographical regions before and after initiation of methane production.
In: FEMS Microbiology Ecology. Bd. 37 (2001) Heft 2 . - S. 175-186.
DOI: https://doi.org/10.1016/S0168-6496(01)00158-1

Friedrich, Michael W. ; Schmitt-Wagner, Dirk ; Lüders, Tillmann ; Brune, Andreas:
Axial differences in community structure of Crenarchaeota and Euryarchaeota in the highly compartmentalized gut of the soil-feeding termite Cubitermes orthognathus.
In: Applied and Environmental Microbiology. Bd. 67 (2001) Heft 10 . - S. 4880-4890.
DOI: https://doi.org/10.1128/AEM.67.10.4880-4890.2001

Matthies, Carola ; Kuhner, Carla H. ; Acker, Georg ; Drake, Harold L.:
Clostridium uliginosum sp. nov., a novel acid-tolerant, anaerobic bacterium with connecting filaments.
In: International Journal of Systematic and Evolutionary Microbiology. Bd. 51 (2001) Heft 3 . - S. 1119-1125.
DOI: https://doi.org/10.1099/00207713-51-3-1119

Gieseke, Armin ; Purkhold, Ulrike ; Wagner, Michael ; Amann, Rudolf ; Schramm, Andreas:
Community tructure and activity dynamics of nitrifying bacteria in a phosphate-removing biofilm.
In: Applied and Environmental Microbiology. Bd. 67 (2001) Heft 3 . - S. 1351-1362.
DOI: https://doi.org/10.1128/AEM.67.3.1351-1362.2001

Küsel, Kirsten ; Roth, Ursula ; Trinkwalter, Tanja ; Peiffer, Stefan:
Effect of pH on the anaerobic microbial cycling of sulfur in mining-impacted freshwater lake sediments.
In: Environmental and Experimental Botany. Bd. 46 (2001) Heft 3 . - S. 213-223.
DOI: https://doi.org/10.1016/S0098-8472(01)00103-4

Weber, Sigrid ; Lüders, Tillmann ; Friedrich, Michael W. ; Conrad, Ralf:
Methanogenic populations involved in the degradation of rice straw in anoxic paddy soil.
In: FEMS Microbiology Ecology. Bd. 38 (2001) Heft 1 . - S. 11-20.
DOI: https://doi.org/10.1111/j.1574-6941.2001.tb00877.x

Lüders, Tillmann ; Chin, Kuk-Jeong ; Conrad, Ralf ; Friedrich, Michael:
Molecular analyses of methyl‐coenzyme M reductase α‐subunit (mcrA) genes in rice field soil and enrichment cultures reveal the methanogenic phenotype of a novel archaeal lineage.
In: Environmental Microbiology. Bd. 3 (2001) Heft 3 . - S. 194-204.
DOI: https://doi.org/10.1046/j.1462-2920.2001.00179.x

Küsel, Kirsten ; Karnholz, Arno ; Trinkwalter, Tanja ; Devereux, Richard ; Acker, Georg ; Drake, Harold L.:
Physiological ecology of Clostridium glycolicum RD-1, an aerotolerant acetogen isolated from sea grass roots.
In: Applied and Environmental Microbiology. Bd. 67 (2001) Heft 10 . - S. 4734-4741.
DOI: https://doi.org/10.1128/AEM.67.10.4734-4741.2001

2000

Fukui, Manabu ; Harms, Gerda ; Rabus, Ralf ; Schramm, Andreas ; Widdel, Friedrich ; Zengler, Karsten ; Boreham, Chris ; Wilkes, Heinz:
Anaerobic degradation of oil hydrocarbons by sulfate-reducing and nitrate-reducing bacteria.
In: Bell, Colin R. (Hrsg.): Microbial biosystems - new frontiers : proceedings of the 8th International Symposium on Microbial Ecology, Halifax, Canada, August 9 - 14, 1998. Band 1. - Kentville, Canada : Atlantic Canada Society for Microbial Ecology, 2000 . - S. 359-367

Matthies, Carola ; Evers, Stefan ; Ludwig, Wolfgang ; Schink, Bernhard:
Anaerovorax odorimutans gen. nov., sp. nov., a putrescine-fermenting, strictly anaerobic bacterium.
In: International Journal of Systematic and Evolutionary Microbiology. Bd. 50 (2000) Heft 4 . - S. 1591-1594.
DOI: https://doi.org/10.1099/00207713-50-4-1591

Lüders, Tillmann ; Friedrich, Michael:
Archaeal population dynamics during sequential reduction processes in rice field soil.
In: Applied and Environmental Microbiology. Bd. 66 (2000) Heft 7 . - S. 2732-2742.
DOI: https://doi.org/10.1128/AEM.66.7.2732-2742.2000

Böttcher, Michael E. ; Hespenheide, Britta ; Llobet-Brossa, Enrique ; Beardsley, Christine ; Larsen, Ole ; Schramm, Andreas ; Wieland, Andrea ; Böttcher, Gerd ; Berninger, Ulrike G. ; Amann, Rudolf:
The biogeeochemistry, stable isotope geochemistry, and microbial community structure of a temperate intertidal mudflat : an integrated study.
In: Continental Shelf Research. Bd. 20 (2000) Heft 12-13 . - S. 1749-1769.
DOI: https://doi.org/10.1016/S0278-4343(00)00046-7

Kuhner, Carla H. ; Matthies, Carola ; Acker, Georg ; Schmittroth, Martina ; Gößner, Anita S. ; Drake, Harold L.:
Clostridium akagii sp. nov. and Clostridium acidisoli sp. nov. : acid-tolerant, N2-fixing clostridia isolated from acidic forest soil and litter.
In: International Journal of Systematic and Evolutionary Microbiology. Bd. 50 (2000) Heft 2 . - S. 873-881.
DOI: https://doi.org/10.1099/00207713-50-2-873

Küsel, Kirsten ; Dorsch, Tanja ; Acker, Georg ; Stackebrandt, Erko ; Drake, Harold L.:
Clostridium scatologenes strain SL1 isolated as an acetogenic bacterium from acidic sediments.
In: International Journal of Systematic and Evolutionary Microbiology. Bd. 50 (2000) Heft 2 . - S. 537-546.
DOI: https://doi.org/10.1099/00207713-50-2-537

Ramakrishnan, Balasubramanian ; Lüders, Tillmann ; Conrad, Ralf ; Friedrich, Magdalena:
Effect of soil aggregate size on methanogenesis and archaeal community structure in anoxic rice field soil.
In: FEMS Microbiology Ecology. Bd. 32 (2000) Heft 3 . - S. 261-270.
DOI: https://doi.org/10.1111/j.1574-6941.2000.tb00719.x

Küsel, Kirsten ; Dorsch, Tanja:
Effect of supplemental electron donors on the microbial reduction of Fe(III), sulfate, and CO2 in coal mining-impacted freshwater lake sediments.
In: Microbial Ecology. Bd. 40 (2000) Heft 3 . - S. 238-249.
DOI: https://doi.org/10.1007/s002480000065

Peine, Ariane ; Küsel, Kirsten ; Tritschler, Andrea ; Peiffer, Stefan:
Electron flow in an iron-rich acidic sedimant - evidence for an acidity-driven iron cycle.
In: Limnology and Oceanography. Bd. 45 (2000) Heft 5 . - S. 1077-1087.
DOI: https://doi.org/10.4319/lo.2000.45.5.1077

Schramm, Andreas ; de Beer, Dirk ; Gieseke, Armin ; Amann, Rudolf:
Microenvironments and distribution of nitrifying bacteria in a membrane-bound biofilm.
In: Environmental Microbiology. Bd. 2 (2000) Heft 6 . - S. 680-686.
DOI: https://doi.org/10.1046/j.1462-2920.2000.00150.x

Oerther, Daniel B. ; Pernthaler, Jakob ; Schramm, Andreas ; Amann, Rudolf ; Raskin, Lutgarde:
Monitoring precursor 16S rRNA of Acinetobacter spp. in activated sludge wastewater treatment systems.
In: Applied and Environmental Microbiology. Bd. 66 (2000) Heft 5 . - S. 2154-2165.

Matthies, Carola ; Springer, Nina ; Ludwig, Wolfgang ; Schink, Bernhard:
Pelospora glutarica gen. nov., sp nov., a glutarate-fermenting, strictly anaerobic, spore-forming bacterium.
In: International Journal of Systematic and Evolutionary Microbiology. Bd. 50 (2000) Heft 2 . - S. 645-648.
DOI: https://doi.org/10.1099/00207713-50-2-645

1999

Küsel, Kirsten ; Pinkart, Holly C. ; Drake, Harold L. ; Devereux, Richard:
Acetogenic and sulfate-reducing bacteria inhabiting the rhizoplane and deep cortex cells of the seagrass Halodule wrightii.
In: Applied and Environmental Microbiology. Bd. 65 (1999) Heft 11 . - S. 5117-5123.

Rabus, Ralf ; Wilkes, Heinz ; Schramm, Andreas ; Harms, Gerda ; Behrends, Astrid ; Amann, Rudolf ; Widdel, Friedrich:
Anaerobic utilization of alkylbenzenes and n-alkanes from crude oil in an enrichment culture of denitrifying bacteria affiliating with the β-subclass of Proteobacteria.
In: Environmental Microbiology. Bd. 1 (1999) Heft 2 . - S. 145-157.
DOI: https://doi.org/10.1046/j.1462-2920.1999.00014.x

von Keitz, Verena ; Schramm, Andreas ; Altendorf, Karlheinz ; Lipski, André:
Characterization of microbial communities of biofilters by phospholipid fatty acid analysis and rRNA targeted oligonucleotide probes.
In: Systematic and Applied Microbiology. Bd. 22 (1999) Heft 4 . - S. 626-634.
DOI: https://doi.org/10.1016/S0723-2020(99)80016-2

Küsel, Kirsten ; Wagner, Christine ; Drake, Harold L.:
Enumeration and metabolic product profiles of the anaerobic microflora in the mineral soil and litter of a beech forest.
In: FEMS Microbiology Ecology. Bd. 29 (1999) Heft 1 . - S. 91-103.
DOI: https://doi.org/10.1111/j.1574-6941.1999.tb00601.x

Matthies, Carola ; Grießhammer, Anja ; Schmittroth, Martina ; Drake, Harold L.:
Evidence for involvement of gut-associated denitrifying bacteria in emission of nitrous oxide (N2O) by earthworms obtained from garden and forest soils.
In: Applied and Environmental Microbiology. Bd. 65 (1999) Heft 8 . - S. 3599-3604.

Seifritz, Corinna ; Fröstl, Jürgen M. ; Drake, Harold L. ; Daniel, Steven L.:
Glycolate as a metabolic substrate for the acetogen Moorella thermoacetica.
In: FEMS Microbiology Letters. Bd. 170 (1999) Heft 2 . - S. 399-405.
DOI: https://doi.org/10.1111/j.1574-6968.1999.tb13400.x

Küsel, Kirsten ; Dorsch, Tanja ; Acker, Georg ; Stackebrandt, Erko:
Microbial reduction of Fe(III) in acidic sediments : Isolation of Acidiphilium cryptum JF-5 capable of coupling the reduction of Fe(III) to the oxidation of glucose.
In: Applied and Environmental Microbiology. Bd. 65 (1999) Heft 8 . - S. 3633-3640.

Küsel, Kirsten ; Drake, Harold L.:
Microbial turnover of low molecular weight organic acids during leaf litter decomposition.
In: Soil Biology & Biochemistry. Bd. 31 (1999) Heft 1 . - S. 107-118.
DOI: https://doi.org/10.1016/S0038-0717(98)00111-4

de Beer, Dirk ; Schramm, Andreas:
Microenvironments and mass transfer phenomena in biofilms studied with microsensors.
In: Rittmann, Bruce E. (Hrsg.): Microbial ecology of biofilms : Selected Proceedings of the International Specialty Conference on Microbial Ecology of Biofilms : Concepts, Tools and Applications. - Oxford : Pergamon, 1999 . - S. 173-178 . - (Water Science and Technology ; 39,7 )
DOI: https://doi.org/10.1016/S0273-1223(99)00165-1

Schramm, Andreas ; de Beer, Dirk ; van den Heuvel, Johan C. ; Ottengraf, Simon ; Amann, Rudolf:
Microscale distribution of populations and activities of Nitrosospira and Nitrospira spp. along a macroscale gradient in a nitrifying bioreactor : quantification by in situ hybridization and the use of microsensors.
In: Applied and Environmental Microbiology. Bd. 65 (1999) Heft 8 . - S. 3690-3696.

Schramm, Andreas ; Amann, Rudolf:
Nucleic acid based techniques for analyzing the diversity, structure, and dynamics of microbial communities in wastewater treatment.
In: Winter, Josef (Hrsg.): Biotechnology. Volume 11a. Environmental Processes I : Wastewater treatment. 2. ed. - Weinheim : Wiley-VCH, 1999 . - S. 85-108
DOI: https://doi.org/10.1002/9783527620944.ch5

Schramm, Andreas ; Santegoeds, Cecilia M. ; Nielsen, Helle K. ; Ploug, Helle ; Wagner, Michael ; Pribyl, Milan ; Wanner, Jiří ; Amann, Rudolf ; de Beer, Dirk:
On to the occurrence of anoxic microniches, denitrification, and sulfate reduction in aerated activated sludge.
In: Applied and Environmental Microbiology. Bd. 65 (1999) Heft 9 . - S. 4189-4196.

Gößner, Anita S. ; Devereux, Richard ; Ohnemüller, Nadja ; Acker, Georg ; Stackebrandt, Erko ; Drake, Harold L.:
Thermicanus aegyptius gen. nov., sp. nov., isolated from oxic soil, a fermentative microaerophile that grows commensally with the thermophilic acetogen Moorella thermoacetica.
In: Applied and Environmental Microbiology. Bd. 65 (1999) Heft 11 . - S. 5124-5133.

1998

de Beer, Dirk ; Schramm, Andreas ; Santegoeds, Cecilia M. ; Nielsen, Helle K.:
Anaerobic processes in activated sludge.
In: Microorganisms in activated sludge and biofilm processes II : Proceedings of the 2nd International Conference on Microorganisms in Activated Sludge and Biofilm Processes, held in Berkeley, USA, 21 - 23 July 1997. - Oxford, UK : Pergamon, 1998 . - S. 605-608 . - (Water Science and Technology ; 37,4-5 )
DOI: https://doi.org/10.1016/S0273-1223(98)00166-8

Michalzik, Beate ; Küsel, Kirsten ; Solinger, Stephan ; Matzner, Egbert:
Dynamics of DOC and DON in forest soils.
In: Mitteilungen der Deutschen Bodenkundlichen Gesellschaft. Bd. 87 (1998) . - S. 225-236.

Limmer, Claudia ; Drake, Harold L.:
Effects of carbon, nitrogen, and electron acceptor availability on anaerobic N2-fixation in a beech forest soil.
In: Soil Biology & Biochemistry. Bd. 30 (1998) Heft 2 . - S. 153-158.
DOI: https://doi.org/10.1016/S0038-0717(97)00099-0

Schramm, Andreas ; de Beer, Dirk ; Wagner, Michael ; Amann, Rudolf:
Identification and activities in situ of Nitrosospira and Nitrospira spp. as dominant populations in a nitrifying fluidized bed reactor.
In: Applied and Environmental Microbiology. Bd. 64 (1998) Heft 9 . - S. 3480-3485.

Schramm, Andreas ; Amann, Rudolf:
In situ structure and function analysis of biofilms.
In: Märkl, Herbert ; Stegmann, Rainer (Hrsg.): Technik anaerober Prozesse : Beiträge einer Veranstaltung des Sonderforschungsbereiches 238 der DFG an der Technischen Universität Hamburg-Harburg in Zusammenarbeit mit dem Forschungsausschuß Biotechnologie der DECHEMA e.V. - Frankfurt am Main : DECHEMA, 1998 . - S. 45-54 . - (DECHEMA-Fachgespräche Umweltschutz )

Schramm, Andreas ; de Beer, Dirk ; van den Heuvel, Johan C. ; Ottengraf, Simon ; Amann, Rudolf:
In situ structure/function studies in wastewater treatment systems.
In: Microorganisms in activated sludge and biofilm processes II : proceedings of the 2nd International Conference on Microorganisms in Activated Sludge and Biofilm Processes, held in Berkeley, USA, 21-23 July 1997. - Oxford, UK : Pergamon, 1998 . - S. 413-416 . - (Water Science and Technology ; 37,4-5 )
DOI: https://doi.org/10.1016/S0273-1223(98)00140-1

Frank, Claudia ; Schwarz, Uwe ; Matthies, Carola ; Drake, Harold L.:
Metabolism of aromatic aldehydes as cosubstrates by the acetogen Clostridium formicoaceticum.
In: Archives of Microbiology. Bd. 170 (1998) Heft 6 . - S. 427-434.
DOI: https://doi.org/10.1007/s002030050663

Santegoeds, Cecilia M. ; Schramm, Andreas ; de Beer, Dirk:
Microsensors as a tool to determine chemical microgradients and bacterial activity in wastewater biofilms and flocs.
In: Biodegradation. Bd. 9 (1998) Heft 3-4 . - S. 159-167.
DOI: https://doi.org/10.1023/A:1008302622946

1997

Drake, Harold L. ; Daniel, Steven L. ; Küsel, Kirsten ; Matthies, Carola ; Kuhner, Carla H. ; Braus-Stromeyer, Susanna:
Acetogenic bacteria : what are the in situ consequences of their diverse metabolic versatilities?
In: BioFactors. Bd. 6 (1997) . - S. 13-24.
DOI: https://doi.org/10.1002/biof.5520060103

Braus-Stromeyer, Susanna ; Schnappauf, Georg ; Braus, Gerhard H. ; Gößner, Anita S. ; Drake, Harold L.:
Carbonic anhydrase in Acetobacterium woodii and other acetogenic bacteria.
In: Journal of Bacteriology. Bd. 179 (1997) Heft 22 . - S. 7197-7200.

Karsten, Gudrun R. ; Drake, Harold L.:
Denitrifying bacteria in the earthworm gastrointestinal tract and the in vivo emission of nitrous oxide (N(inf2)O) by earthworms.
In: Applied and Environmental Microbiology. Bd. 63 (1997) Heft 5 . - S. 1878-1882.

Matthies, Carola ; Erhard, Hans-Peter ; Drake, Harold L.:
Effects of pH on the comparative culturability of fungi and bacteria from acidic and less acidic forest soils.
In: Journal of Basic Microbiology. Bd. 37 (1997) Heft 5 . - S. 335-343.
DOI: https://doi.org/10.1002/jobm.3620370506

Karsten, Gudrun R.:
Mikrobielle Populationen und Prozesse im Darm von Regenwürmern (Oligochaeta, Lumbricidae).
Bayreuth : Bayreuther Inst. für Terrestrische Ökosystemforschung , 1997 . - IX, 292 S. - (Bayreuther Forum Ökologie ; 43 )
( Dissertation, 1997 , Universität Bayreuth, Fakultät für Biologie, Chemie und Geowissenschaften)

de Beer, Dirk ; Schramm, Andreas ; Santegoeds, Cecilia M. ; Kühl, Michael:
A nitrite microsensor for profiling environmental biofilms.
In: Applied and Environmental Microbiology. Bd. 63 (1997) Heft 3 . - S. 973-977.

Kuhner, Carla H. ; Grießhammer, Anja ; Drake, Harold L. ; Frank, Claudia ; Schmittroth, Martina ; Acker, Georg ; Gößner, Anita S.:
Sporomusa silvacetica sp. nov., an acetogenic bacterium isolated from aggregated forest soil.
In: International Journal of Systematic Bacteriology. Bd. 47 (1997) Heft 2 . - S. 352-358.
DOI: https://doi.org/10.1099/00207713-47-2-352

Schramm, Andreas ; Larsen, Lars H. ; Revsbech, Niels Peter ; Amann, Rudolf:
Structure and function of a nitrifying biofilm as determined by microelectrodes and fluorescent oligonucleotide probes.
In: Harremoës, Poul (Hrsg.): Biofilm systems III : selected proceedings of the IAWQ 3rd International Specialised Conference on Biofilm Systems, held in Copenhagen, Denmark, 27 - 30 August 1996. - Oxford, UK : Pergamon, 1997 . - S. 263-270 . - (Water Science and Technology ; 36,1 )
DOI: https://doi.org/10.1016/S0273-1223(97)00333-8

1996

Wagner, Christine ; Grießhammer, Anja ; Drake, Harold L.:
Acetogenic capacities and the anearobic turnover of carbon in a Kansas prairie soil.
In: Applied and Environmental Microbiology. Bd. 62 (1996) Heft 2 . - S. 494-500.

Küsel, Kirsten:
Anaerober Abbau von organischem Kohlenstoff in Waldböden : Acetat als Bindeglied anearober und aerober Prozesse.
Bayreuth : Bayreuther Inst. für Terrestrische Ökosystemforschung , 1996 . - XVII, 146 S. - (Bayreuther Forum Ökologie ; 32 )
( Dissertation, 1996 , Universität Bayreuth, Fakultät für Biologie, Chemie und Geowissenschaften)

Küsel, Kirsten ; Drake, Harold L.:
Anaerobic capacities of leaf litter.
In: Applied and Environmental Microbiology. Bd. 62 (1996) Heft 11 . - S. 4216-4219.

Drake, Harold L. ; Aumen, Nicholas G. ; Kuhner, Carla H. ; Wagner, Christine ; Grießhammer, Anja ; Schmittroth, Martina:
Anaerobic microflora of Everglades sediments : effects of nutrients on population profiles and activities.
In: Applied and Environmental Microbiology. Bd. 62 (1996) Heft 2 . - S. 486-493.

Parekh, Manish ; Drake, Harold L. ; Daniel, Steven L.:
Bidirectional transformation of aromatic aldehydes by Desulfovibrio desulfuricans under nitrate-dissimilating conditions.
In: Letters in Applied Mircobiology. Bd. 22 (1996) Heft 2 . - S. 115-120.
DOI: https://doi.org/10.1111/j.1472-765X.1996.tb01122.x

Misoph, Martina ; Daniel, Steven L. ; Drake, Harold L.:
Bidirectional usage of ferulate by the acetogen Peptostreptococcus productus U-1 : CO2 and aromatic acrylate groups as competing electron acceptors.
In: Microbiology. Bd. 142 (1996) Heft 8 . - S. 1983-1988.
DOI: https://doi.org/10.1099/13500872-142-8-1983

Misoph, Martina ; Drake, Harold L.:
Effect of CO2 on the fermentation capacities of the acetogen Peptostreptococcus productus U-1.
In: Journal of Bacteriology. Bd. 178 (1996) Heft 11 . - S. 3140-3145.

Fröstl, Jürgen M. ; Seifritz, Corinna ; Drake, Harold L.:
Effect of nitrate on the autotrophic metabolism of the acetogens Clostridium thermoautotrophicum and Clostridium thermoaceticum.
In: Journal of Bacteriology. Bd. 178 (1996) Heft 15 . - S. 4597-4603.

Limmer, Claudia:
N2-Fixierung in Waldböden.
Bayreuth : Bayreuther Inst. für Terrestrische Ökosystemforschung , 1996 . - XI, 80 S. - (Bayreuther Forum Ökologie ; 35 )
( Dissertation, 1996 , Universität Bayreuth, Fakultät für Biologie, Chemie und Geowissenschaften)

Limmer, Claudia ; Drake, Harold L.:
Non-symbiotic N2-fixation in acidic and pH-neutral forest soils : Aerobic and anaerobic differentials.
In: Soil Biology & Biochemistry. Bd. 28 (1996) Heft 2 . - S. 177-183.
DOI: https://doi.org/10.1016/0038-0717(95)00118-2

Drake, Harold L.:
Regulation of the C1 metabolism of acetogens : metabolic by-passes and ecological implications.
In: Lidstrom, Mary E. ; Tabita, F. Robert (Hrsg.): Microbial growth on C1 compounds : Proceedings of the 8th International Symposium on Microbial Growth on C1 Compounds, held in San Diego, U.S.A., 27 August - 1 September 1995. - Dordrecht : Kluwer, 1996 . - S. 72-79

Schramm, Andreas ; Larsen, Lars H. ; Revsbech, Niels Peter ; Ramsing, Niels B. ; Amann, Rudolf ; Schleifer, Karl-Heinz:
Structure and function of a nitrifying biofilm as determined by in situ hybridization and the use of microelectrodes.
In: Applied and Environmental Microbiology. Bd. 62 (1996) Heft 12 . - S. 4641-4647.

1995

Karsten, Gudrun R. ; Drake, Harold L.:
Comparative assessment of the aerobic and anaerobic microfloras of earthworm guts and forest soils.
In: Applied and Environmental Microbiology. Bd. 61 (1995) Heft 3 . - S. 1039-1044.

Küsel, Kirsten ; Drake, Harold L.:
Effects of environmental parameters on the formation and turnover of acetate by forest soils.
In: Applied and Environmental Microbiology. Bd. 61 (1995) Heft 10 . - S. 3667-3675.

Allison, Milton J. ; Daniel, Steven L. ; Cornick, Nancy A.:
Oxalate-degrading bacteria.
In: Khan, Saeed R. (Hrsg.): Calcium oxalate in biological systems. - Boca Raton : CRC Press, 1995 . - S. 131-168

Drake, Harold L.:
Regulation of the CO2-fixation potentials and substrate/product diversity of acetogenic bacteria.
In: Nicholas, Kenneth ; Ljungdahl, Lars G. (Hrsg.): Third International Conference on Carbon Dioxide Utilization : ICCDU III : abstracts. - Norman, USA : University of Oklahoma, Oklahoma Center for Continuing Education, 1995 . - S. 61-63

1994

Küsel, Kirsten ; Drake, Harold L.:
Acetate synthesis in soil from a Bavarian beech forest.
In: Applied and Environmental Microbiology. Bd. 60 (1994) Heft 4 . - S. 1370-1373.

Drake, Harold L. ; Daniel, Steven L. ; Matthies, Carola ; Küsel, Kirsten:
Acetogenesis : Reality in the laboratory, uncertainty elsewhere.
In: Drake, Harold L. (Hrsg.): Acetogenesis. - New York : Chapman & Hall, 1994 . - S. 273-302 . - (Chapman & Hall Microbiology Series )
DOI: https://doi.org/10.1007/978-1-4615-1777-1_10

Drake, Harold L.:
Acetogenesis and acetogenic bacteria.
In: Lederberg, Joshua (Hrsg.): Encyclopedia of microbiology. Band 1. - San Diego : Academic Press, 1994 . - S. 1-15

Gößner, Anita S. ; Daniel, Steven L. ; Drake, Harold L.:
Acetogenesis coupled to the oxidation of aromatic aldehyde groups.
In: Archives of Microbiology. Bd. 161 (1994) Heft 2 . - S. 126-131.
DOI: https://doi.org/10.1007/BF00276472

Drake, Harold L.:
Acetogenesis, acetogenic bacteria, and the acetyl-CoA "Wood/Ljungdahl" pathway : past and current perspectives.
In: Drake, Harold L. (Hrsg.): Acetogenesis. - New York : Chapman & Hall, 1994 . - S. 3-60 . - (Chapman & Hall Microbiology Series )
DOI: https://doi.org/10.1007/978-1-4615-1777-1_1

Akagi, J. M. ; Drake, Harold L. ; Kim, Jae-Ho ; Gevertz, Diane:
Thiosulfate and trithionate reductases.
In: Peck, Harry D. (Hrsg.): Inorganic microbial sulfur metabolism. - San Diego : Academic Press, 1994 . - S. 260-270 . - (Methods in Enzymology ; 243 )
DOI: https://doi.org/10.1016/0076-6879(94)43019-5

1993

Drake, Harold L.:
CO2, reductant, and the autotrophic acetyl-CoA pathway : alternative origins and destinations.
In: Murrell, J. Colin ; Kelly, D. P. (Hrsg.): Microbial growth on C1 compounds. - Andover : Intercept, 1993 . - S. 493-507

Matthies, Carola ; Freiberger, Anja ; Drake, Harold L.:
Fumarate dissimilation and differential reductant flow by Clostridium formicoaceticum and Clostridium aceticum.
In: Archives of Microbiology. Bd. 160 (1993) Heft 4 . - S. 273-278.
DOI: https://doi.org/10.1007/BF00292076

Seifritz, Corinna ; Daniel, Steven L. ; Gößner, Anita S. ; Drake, Harold L.:
Nitrate as a preferred electron sink for the acetogen Clostridium thermoaceticum.
In: Journal of Bacteriology. Bd. 175 (1993) Heft 24 . - S. 8008-8013.

Daniel, Steven L. ; Drake, Harold L.:
Oxalate- and glyoxylate-dependent growth and acetogenesis by Clostridium thermoaceticum.
In: Applied and Environmental Microbiology. Bd. 59 (1993) Heft 9 . - S. 3062-3069.

1992

Parekh, Manish ; Keith, Elizabeth S. ; Daniel, Steven L. ; Drake, Harold L.:
Comparative evaluation of the metabolic potentials of different strains of Peptostreptococcus productus : utilization and transformation of aromatic compounds.
In: FEMS Microbiology Letters. Bd. 94 (1992) Heft 1-2 . - S. 69-74.
DOI: https://doi.org/10.1111/j.1574-6968.1992.tb05291.x

Lux, Mary F. ; Drake, Harold L.:
Re-examination of the metabolic potentials of the acetogens Clostridium aceticum and Clostridium formicoaceticum : chemolithoautotrophic and aromatic-dependent growth.
In: FEMS Microbiology Letters. Bd. 95 (1992) Heft 1 . - S. 49-56.
DOI: https://doi.org/10.1111/j.1574-6968.1992.tb05341.x

1991

Daniel, Steven L. ; Keith, Elizabeth S. ; Yang, Hsiuchin ; Lin, Yu-Su ; Drake, Harold L.:
Utilization of methoxylated aromatic compounds by the acetogen Clostridium thermoaceticum : expression and specificity of the co-dependent O-demethylating activity.
In: Biochemical and Biophysical Research Communications. Bd. 180 (1991) Heft 1 . - S. 416-422.
DOI: https://doi.org/10.1016/S0006-291X(05)81309-9

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